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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C9.38.v11....' > 
  2. Transcript 'Cisavi.CG.ENS81.R25....' > 
  3. Transcript 'Boleac.CG.SB_v3.S47....' > 
  4. Transcript 'Phfumi.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S1301.g03546.01.t

Possible name(s)

VIPAS39

Gene model

Phfumi.CG.MTP2014.S1301.g03546

Location

S1301 [9,508 / 11,416]

Sequences

Amino acid sequence

Length: 200

>Phfumi.CG.MTP2014.S1301.g03546.01.p
MVERQSAVEDGDSAGEKTGQVMVFKSHPRKETIIHKPVVDTLFYCCYYHWGEAEGLLSSP
TSIRNQHKISEKQFMFTSIAALCRMRRWRDIENLLTVPRSLFRSARLQAVIGFDRVVDVL
SKNLAPGDALAKYCAEIDTSDRRVEMAVKLKCYKVAIDTFVYQRERQQLMLYLDQIPQSN
LHMRQYLSNQLRSQDIKWKN

Nucleotide sequence

Length: 666

>Phfumi.CG.MTP2014.S1301.g03546.01.t
TATTATTTTGATGCTGATATTTGACTTGCAAATGACACAAGCGCGATATTTGAACAAATT
TCTATGGTGGAGAGACAGTCGGCAGTGGAGGACGGCGACAGTGCAGGTGAAAAAACTGGA
CAAGTTATGGTTTTCAAAAGTCATCCTCGTAAGGAAACTATCATCCACAAACCTGTGGTG
GACACTTTGTTCTATTGCTGTTATTATCATTGGGGAGAAGCAGAGGGACTTCTAAGTAGT
CCAACATCAATTCGAAACCAGCACAAAATCAGTGAAAAACAATTTATGTTCACATCGATA
GCAGCGTTGTGCAGAATGCGAAGATGGAGAGATATCGAAAATCTTTTAACTGTTCCCCGG
TCATTGTTTCGAAGTGCGAGATTACAAGCAGTTATCGGTTTTGATCGAGTTGTTGATGTT
TTGAGCAAAAATCTGGCTCCTGGGGATGCGCTTGCAAAATATTGTGCTGAAATTGATACA
TCTGACAGAAGAGTAGAGATGGCTGTGAAGTTAAAATGTTATAAAGTTGCAATTGATACA
TTTGTATATCAGCGAGAGCGACAGCAACTGATGTTGTATTTGGATCAAATCCCACAAAGT
AATCTACATATGAGGCAGTATTTATCAAATCAGTTAAGGTCACAGGATATCAAATGGAAA
AACTAG

InterProScan

Gene3D
Vps16_C_sf (IPR038132) - T[23-154] 8.1E-7
Pfam
Vps16_C (IPR006925) - T[62-180] 3.9E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SPE39_HUMAN 38.5 % 149 1.41E-42