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TRANSCRIPT CARD

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  1. Clone 'cicx004i03'
  2. Clone 'ma180g02'
  3. Clone 'ma178i14'
  4. Transcript 'Phfumi.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S13058.g09064.01.t

Possible name(s)

ATP5F1D

Location

S13058 [345 / 2,000]

Sequences

Amino acid sequence

Length: 154

>Phfumi.CG.MTP2014.S13058.g09064.01.p
IMAQPRLIRSYAEAAAAPVAQPGQMVFTFAAPDEAYYQKSTKVKQVDVPTGTGFIGILAS
HVPTFGVLKPGVLTVMESEGAVNKFFVSSGTYAVNEDSTVQITAEEAVPLDALDKDLAKS
CLHKAQSEMSAASTDIARAEVQVAIQTYEEILAA

Nucleotide sequence

Length: 465

>Phfumi.CG.MTP2014.S13058.g09064.01.t
ATAATGGCACAACCACGATTGATCCGAAGCTATGCCGAAGCTGCTGCAGCACCTGTTGCA
CAGCCAGGACAAATGGTTTTCACATTTGCTGCTCCAGATGAGGCTTACTACCAAAAGAGC
ACCAAAGTCAAGCAAGTTGACGTACCCACAGGGACTGGGTTTATCGGTATATTGGCAAGC
CACGTTCCTACATTTGGTGTATTGAAACCTGGTGTTCTGACGGTGATGGAATCAGAAGGA
GCAGTTAACAAATTCTTTGTGAGCAGTGGTACTTATGCTGTTAACGAAGACTCGACAGTT
CAAATCACTGCAGAAGAAGCTGTTCCTCTTGATGCTCTTGATAAAGATCTTGCCAAGTCG
TGCCTGCACAAAGCACAATCAGAGATGTCAGCAGCATCCACTGACATTGCAAGGGCGGAA
GTTCAAGTTGCCATCCAAACTTATGAAGAAATATTAGCAGCATGA

InterProScan

PANTHER
ATP_synth_F1_dsu/esu (IPR001469) - T[3-151] 1.9E-40
Gene3D
ATPsynth_dsu/esu_N (IPR036771) - T[10-113] 2.0E-35
Hamap
ATP_synth_F1_dsu/esu (IPR001469) - T[23-150] 13.465
SUPERFAMILY
ATPsynth_dsu/esu_N (IPR036771) - T[25-108] 2.09E-16
CDD
ATP_synth_F1_dsu/esu (IPR001469) - T[25-149] 3.16613E-28
ProDom
ATP_synth_F1_dsu/esu_N (IPR020546) - T[30-113] 3.0E-20
Pfam
ATP_synth_F1_dsu/esu_N (IPR020546) - T[31-107] 6.8E-13
SUPERFAMILY
ATP_F1_dsu/esu_C_sf (IPR036794) - T[112-152] 1.23E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ATPD_HUMAN 50.376 % 135 4.04E-41