Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Clone 'ma104p09' > 
  2. Clone 'ma325e03' > 
  3. Clone 'mae32d09' > 
  4. Transcript 'Phfumi.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S13752.g09145.01.t

Possible name(s)

AC012314.17; RPS9

Gene model

Phfumi.CG.MTP2014.S13752.g09145

Location

S13752 [1,755 / 4,376]

Sequences

Amino acid sequence

Length: 150

>Phfumi.CG.MTP2014.S13752.g09145.01.p
VWRVKYTLAKIRKAARDLLTLDEKDTRRLFEGNALLRRLVRIGVLDEGKMKLDYVLGLKV
EDFLERRLQTQVFKLGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLR
SPYGGGRPGRVKRRNQKKTSGGGDEDEDED

Nucleotide sequence

Length: 450

>Phfumi.CG.MTP2014.S13752.g09145.01.t
GTATGGAGGGTAAAATACACTCTGGCCAAAATCCGCAAAGCTGCCCGTGACTTGCTAACA
CTTGATGAAAAAGATACAAGGCGACTTTTCGAAGGCAACGCATTGCTAAGGCGATTGGTG
AGAATTGGAGTGTTGGATGAAGGCAAAATGAAACTCGATTATGTCTTGGGTTTGAAAGTA
GAAGATTTTTTGGAACGCCGACTTCAGACTCAAGTGTTTAAACTTGGTTTGGCAAAATCA
ATTCATCATGCCAGAATTCTCATTCGCCAAAGGCATATTAGAGTCCGCAAGCAAGTGGTC
AACATTCCCTCCTTTATTGTGAGACTCGACTCCCAGAAACACATAGATTTCTCACTTCGA
TCTCCATACGGTGGTGGAAGACCAGGACGTGTAAAGCGCCGTAACCAAAAGAAAACTTCG
GGTGGAGGTGATGAAGATGAAGACGAGGAT

InterProScan

TIGRFAM
Ribosomal_S4/S9_euk/arc (IPR005710) - T[1-123] 6.1E-52
PANTHER
Ribosomal_S4/S9 (IPR022801) - T[1-149] 2.3E-76
ProSitePatterns
Ribosomal_S4_CS (IPR018079) - T[64-88] .
ProSiteProfiles
S4_RNA-bd (IPR002942) - T[66-137] 10.213
Pfam
S4_RNA-bd (IPR002942) - T[66-109] 1.7E-10
CDD
S4_RNA-bd (IPR002942) - T[66-108] 5.85719E-7
SMART
S4_RNA-bd (IPR002942) - T[66-137] 0.0052
Gene3D
S4_RNA-bd_sf (IPR036986) - T[67-138] 9.2E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS9_HUMAN 87.5 % 260 2.57E-90