- Transcript 'Boleac.CG.SB_v3.S151...' >
- Molecular Tool 'BMP5-8-MO (Lemaire Lab)' >
- Transcript 'Cisavi.CG.ENS81.R113...' >
- Clone 'cilv006m24' >
- Transcript 'Phfumi.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S1379.g03647.01.t
Possible name(s)
EXD3; EXOSC10
Gene model
Location
S1379 [17,618 / 21,725]
Amino acid sequence
Length: 840
>Phfumi.CG.MTP2014.S1379.g03647.01.p
MDEKQNTSENVINANEVAKQSLASVLQFVRSTHGFPGAGDDFEFYSSFTGFRDFVADQKN
RMLHGISQLLSNQGLKKNFSTSTSDIDEYTDCLIECNDGLLERVSVLIDECSGVRKAKDT
SENSPENLSKSAPIEEPKTVISSWNKVNKQGKSKTFRLMQAHNIIRPQLKFREVIDNTNS
PFVPKLTTKPNALRPLDQNLLKTNTKEQGSSLTIDGLIKQAREAQTEDLLINEHPYKYEL
EHWEPRDEQLGKVNPLKYKDLRADAHVMVTTVEQLQKLLDDLKCVEEFAVDLEHHSYRTF
QGITCLMQISTRTKDYIVDTLLLRSDLHILNEVFTQPAIVKVFHGADSDVMWLQRDFGIY
IVNLFDTGIASHSLQLPRHSLDFLLHYYCNLNIDKKFQLADWRIRPLPEEMVAYAKGDTH
YLLYVYDLMRNELVERANGNSHLLRHVLNSSRDLCLMRYEKPLITPTSHLLLLERRNRRG
KGKALNTQQMEALRLMYNWRDSMARQEDESTGYVLPNHMLLQIAEILPREAQGVLACCNP
IPPLLRQHVLVVHRLVMDARAKPNTKPGTAIKESTNSTTETRVPVPAKSEDTYEDFLRCP
HDWSRGSPAQLSFRQSSETKIRSMPSSSLFGPDGNESTPKMAKYALIPTRLDTKTVVQKL
NAIRQATWNPFQLFMPGGFTGSPKRSISESALPDGKDVTPTLRHMLSGDFIWKMKRVEQD
PKKEVEVDNDTPETFGTVITVPDEARRDTQEQAQVLRHIMKPKKHAGNGACAKHQHSFSA
PAVTFEPPQPNVHNPSPGAKRGFKRNRPGGRGNFVPHKFSNDDFSRFQKRGSMKKKKYHH
Nucleotide sequence
Length: 2,523
>Phfumi.CG.MTP2014.S1379.g03647.01.t
ATGGATGAAAAACAGAACACGAGTGAAAATGTTATAAATGCTAATGAAGTAGCGAAGCAG
TCTCTTGCATCTGTGCTGCAGTTTGTTCGCTCAACCCATGGCTTTCCTGGAGCTGGTGAT
GATTTTGAGTTTTACAGCAGCTTCACAGGATTTCGGGATTTTGTTGCAGACCAAAAGAAC
AGAATGCTCCATGGCATATCACAGCTTTTATCCAATCAAGGTTTAAAGAAAAACTTTAGT
ACCAGCACCTCTGACATAGACGAATATACTGATTGCCTAATTGAATGCAATGATGGTTTG
CTGGAAAGAGTTTCAGTCCTAATCGATGAATGCAGTGGAGTTAGAAAGGCCAAAGACACA
AGTGAAAATAGTCCTGAGAATTTATCAAAGTCTGCACCAATTGAGGAGCCAAAAACAGTC
ATCTCATCATGGAACAAAGTAAATAAACAAGGAAAATCAAAAACATTTAGGTTGATGCAA
GCCCATAACATCATTCGACCTCAACTCAAGTTCCGTGAAGTTATTGACAACACAAACTCT
CCCTTTGTTCCAAAACTTACAACAAAACCTAATGCATTAAGGCCCCTGGATCAAAACTTG
TTAAAAACCAATACAAAAGAGCAAGGTAGCTCGTTGACGATTGACGGTTTGATCAAACAG
GCTAGAGAAGCACAAACAGAAGATCTATTAATTAATGAACATCCTTACAAATATGAATTG
GAACACTGGGAGCCAAGAGATGAGCAACTTGGTAAAGTGAACCCACTAAAATATAAGGAC
TTGCGTGCGGATGCACATGTGATGGTTACCACTGTTGAACAATTACAAAAACTCCTTGAT
GATTTAAAATGTGTTGAAGAGTTTGCAGTTGATTTGGAACACCACTCATACAGAACCTTC
CAGGGAATAACATGCCTAATGCAGATATCAACTCGTACAAAAGACTACATTGTGGACACA
TTACTATTGAGATCTGATCTTCATATTCTTAATGAGGTTTTTACTCAACCTGCAATAGTA
AAAGTATTTCACGGTGCAGATTCAGATGTGATGTGGCTGCAAAGGGACTTTGGAATTTAC
ATTGTTAATCTCTTTGATACTGGTATTGCCTCCCATTCCTTACAGTTACCACGCCATTCA
CTTGATTTTCTGCTACATTACTACTGCAATTTAAACATTGACAAAAAGTTTCAACTGGCT
GATTGGCGAATTAGACCTTTACCTGAGGAAATGGTGGCATATGCTAAGGGCGACACACAC
TATCTGCTTTATGTGTACGATCTAATGAGAAACGAACTAGTTGAGCGGGCCAACGGCAAC
TCTCACCTCTTGCGTCATGTGCTAAACAGCAGTCGTGACTTGTGTCTAATGCGTTATGAG
AAGCCTTTGATCACCCCAACGTCACATTTACTTTTGCTTGAAAGGCGAAACCGGCGTGGT
AAGGGAAAAGCCCTAAACACGCAGCAAATGGAAGCTCTGCGTCTTATGTATAACTGGCGT
GACTCTATGGCGAGGCAGGAAGACGAAAGTACTGGGTATGTTCTGCCAAATCACATGCTG
CTACAGATAGCTGAAATCTTGCCACGTGAAGCACAGGGCGTACTTGCATGTTGTAATCCC
ATTCCACCCCTACTTAGGCAGCATGTTTTGGTGGTTCATCGCCTTGTCATGGATGCAAGA
GCGAAACCTAATACAAAACCAGGCACTGCCATAAAGGAGTCGACCAACAGCACCACAGAA
ACAAGGGTACCAGTGCCTGCTAAATCCGAGGACACCTATGAAGATTTTCTCCGTTGTCCG
CACGACTGGTCACGTGGCAGCCCGGCCCAGCTTTCCTTTCGTCAGTCGTCGGAGACAAAA
ATCAGATCCATGCCAAGTTCAAGTCTGTTTGGACCTGATGGAAATGAATCAACGCCAAAA
ATGGCAAAGTATGCTTTAATACCGACAAGGCTGGATACCAAGACTGTTGTGCAAAAGTTA
AATGCAATTCGGCAAGCAACATGGAATCCCTTTCAACTGTTCATGCCTGGTGGTTTCACT
GGATCACCTAAAAGAAGTATCTCAGAGAGTGCGCTTCCTGACGGAAAAGACGTCACTCCC
ACATTGCGGCACATGCTTTCAGGAGACTTTATTTGGAAAATGAAACGAGTGGAGCAAGAT
CCAAAAAAGGAAGTTGAAGTTGATAATGACACACCTGAGACGTTTGGCACAGTTATTACT
GTCCCCGATGAAGCCCGTCGAGATACACAGGAACAAGCACAAGTGCTTCGACACATTATG
AAACCAAAAAAGCATGCAGGAAATGGGGCATGTGCAAAACACCAGCACTCGTTTAGTGCA
CCTGCAGTCACGTTTGAACCACCACAGCCAAACGTACATAATCCAAGTCCAGGAGCAAAG
CGGGGTTTCAAGAGAAACAGGCCCGGTGGACGTGGTAACTTTGTTCCCCACAAGTTTTCC
AATGATGACTTTTCACGATTTCAAAAAAGGGGTTCAATGAAAAAGAAGAAATATCATCAT
TGA
| Pfam |
Exosome-assoc_fac_Rrp6_N (IPR012588) - T[27-113] 1.4E-14 |
| SUPERFAMILY |
RNaseH-like_sf (IPR012337) - T[164-463] 1.52E-80 |
| SMART |
3'-5'_exonuclease_dom (IPR002562) - T[266-434] 3.0E-46 |
| Pfam |
3'-5'_exonuclease_dom (IPR002562) - T[267-433] 2.2E-46 |
| SUPERFAMILY |
HRDC-like_sf (IPR010997) - T[484-566] 1.23E-22 |
| SMART |
HRDC_dom (IPR002121) - T[486-566] 9.8E-14 |
| ProSiteProfiles |
HRDC_dom (IPR002121) - T[486-566] 16.327 |
| Pfam |
HRDC_dom (IPR002121) - T[490-549] 7.2E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EXOSX_HUMAN | 44.942 % | 568 | 0 |