- Transcript 'KH2012:KH.C1.307.v1....' >
- EST 'FF927585.1' >
- Clone 'cijv004b20' >
- Transcript 'KH2012:KH.C1.567.v2....' >
- Transcript 'Phfumi.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S1478.g03770.01.t
Possible name(s)
SLC6A11; SLC6A2; SLC6A4
Gene model
Location
S1478 [16,850 / 22,613]
Amino acid sequence
Length: 457
>Phfumi.CG.MTP2014.S1478.g03770.01.p
MSSKECKVIYDEKEMESSKSSSEEESITRETWGKQWEFIFAMVGYSVGLGNVWRFPYLCY
RNGGGAFLLVYLLIMLVGGIPMFFLEVALGQYTRLGAVEVWKILPSMKGVGYGCTFVNLV
FSTYNMVVMAWSVYYFFHCLFPGDLAWTLCGQWWNSPNCQLPGFQENQTTGGNGTYAVVN
SSEVNVSALVVSPETEFWRRNVLQQSSGLSEMGTITNWPLVACFLGSWVVIYLCIFKGTR
WSGKVVYFTSTLPYVLLTVLLVRGLTLEGASTGIEYLLKPNFTKLTEAQDKDVSEVATAG
PGLVFLVYPVGLSLLPLPKLWSGLFFVTLFLVGVDTQFACVECGVSTIADVVPRMKRGKY
GQEKLTAIVAGTLMFLGLPLLTNGGIYLFELLNMYAASGISLLYLVFFEAIAIGWIYGAD
RFYGNIELMIGYSPIGYFKYCYKFVTPLMAMVSMWMM
Nucleotide sequence
Length: 1,371
>Phfumi.CG.MTP2014.S1478.g03770.01.t
ATGAGTTCAAAAGAATGCAAAGTCATCTACGACGAGAAGGAGATGGAGAGCTCCAAGTCC
AGCAGCGAAGAGGAGAGCATCACGAGGGAAACGTGGGGAAAACAGTGGGAGTTCATATTT
GCAATGGTCGGCTATTCAGTTGGCCTCGGGAACGTTTGGCGCTTCCCCTACTTGTGTTAC
CGAAACGGCGGAGGTGCTTTTCTGCTGGTGTACCTTCTAATCATGCTGGTCGGCGGCATT
CCAATGTTTTTCCTTGAAGTTGCCCTTGGTCAGTACACCAGGCTGGGCGCGGTTGAAGTC
TGGAAAATTCTCCCTTCCATGAAGGGTGTCGGATACGGATGTACTTTCGTCAACCTCGTG
TTCAGCACCTACAATATGGTGGTGATGGCTTGGTCCGTCTACTACTTCTTTCACTGTTTG
TTTCCCGGGGATCTCGCATGGACGCTATGCGGACAATGGTGGAACAGCCCAAATTGCCAA
CTGCCGGGATTTCAAGAAAACCAAACCACAGGGGGCAACGGAACCTATGCAGTGGTCAAC
AGTAGCGAGGTCAACGTGTCTGCATTGGTTGTGTCGCCTGAAACAGAATTCTGGAGACGA
AACGTTCTACAGCAATCATCAGGACTCTCCGAAATGGGAACGATCACAAACTGGCCTTTG
GTGGCCTGTTTCCTTGGTTCCTGGGTCGTGATTTACCTTTGTATATTTAAAGGCACTCGC
TGGAGCGGAAAGGTCGTGTACTTCACATCAACACTCCCGTATGTCCTCCTTACAGTCCTC
CTAGTCAGGGGCTTGACACTCGAGGGCGCTTCAACCGGCATCGAGTATCTGCTCAAGCCG
AATTTTACCAAGTTAACGGAGGCCCAAGATAAGGATGTGAGCGAAGTAGCCACAGCGGGG
CCTGGACTTGTGTTTCTTGTGTACCCGGTTGGTTTGTCGCTCCTTCCGCTGCCGAAGCTC
TGGTCAGGGCTCTTCTTCGTTACTCTTTTCCTGGTGGGAGTCGACACACAATTTGCTTGT
GTGGAGTGCGGAGTGTCCACCATTGCAGACGTCGTTCCAAGGATGAAGCGAGGCAAATAC
GGACAGGAAAAACTAACCGCAATCGTCGCTGGAACTCTCATGTTTCTAGGGCTTCCTCTA
CTCACCAACGGTGGTATCTATCTGTTCGAGCTACTGAACATGTACGCTGCCAGCGGCATA
TCCCTGTTGTATCTGGTGTTCTTTGAAGCGATCGCTATCGGCTGGATTTACGGGGCCGAC
CGCTTCTATGGCAACATCGAGTTGATGATCGGCTACTCCCCGATCGGTTACTTCAAGTAC
TGCTACAAGTTCGTCACCCCATTAATGGCGATGGTAAGTATGTGGATGATG
| PANTHER |
Na/ntran_symport (IPR000175) - T[17-289] 1.4E-148 - T[287-454] 1.4E-148 |
| ProSiteProfiles |
Na/ntran_symport (IPR000175) - T[28-457] 60.194 |
| SUPERFAMILY |
SNS_sf (IPR037272) - T[29-456] 2.35E-115 |
| Pfam |
Na/ntran_symport (IPR000175) - T[29-289] 1.1E-91 |
| PRINTS |
Na/ntran_symport (IPR000175) - T[37-58] 1.6E-38 - T[66-85] 1.6E-38 - T[109-135] 1.6E-38 - T[399-419] 1.6E-38 - T[439-457] 1.6E-38 |
| ProSitePatterns |
Na/ntran_symport (IPR000175) - T[53-67] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| S6A11_HUMAN | 35.671 % | 315 | 4.8E-101 |
| SC6A2_HUMAN | 42.907 % | 240 | 8.05E-73 |
| SC6A4_HUMAN | 34.406 % | 261 | 1.29E-80 |