Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Phfumi.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S1495.g03793.01.t

Possible name(s)

NKX2-3; NKX2-5; NKX2-6

Location

S1495 [19,274 / 21,197]

Sequences

Amino acid sequence

Length: 323

>Phfumi.CG.MTP2014.S1495.g03793.01.p
MQLLHSARRKQALLVPAAPFRSLYNAGAVKEFAPQRDESDSVMRFCVADGPCFWLYSEKS
DNFSESNCSGSPEESDKKKGDEDGMKARHRTRRKPRVLFSQAQVFELERRFKQQRYLSAP
EREHLAQILKLTSTQVKIWFQNRRYKCKRMRQDKTLELASIGPPRRVAVPVLVRDGKPCL
GGPGAGIQNSHAPYSAPYNVTVTPYHNYPNSYNSCGYNSYSHPNPNAYAPGAAAAAAVAG
AAAAAYGTAVSAGYNGFSGPGMSGGQGGPMTGYPTPTLHPQHPNPVAMGSSPFGTSTMSP
GQVGQPGLHPTPSDYMYKLGLCT

Nucleotide sequence

Length: 972

>Phfumi.CG.MTP2014.S1495.g03793.01.t
ATGCAGCTCCTGCATTCGGCGCGTCGCAAACAGGCCTTGCTGGTCCCAGCGGCGCCATTC
AGATCGCTTTACAATGCGGGGGCGGTGAAAGAATTCGCGCCGCAACGCGATGAATCAGAT
TCCGTGATGAGATTTTGTGTTGCTGACGGGCCGTGTTTCTGGCTATACTCTGAAAAGTCG
GACAATTTCTCGGAGAGCAACTGCAGCGGAAGTCCGGAAGAGAGCGACAAAAAGAAGGGT
GATGAGGATGGGATGAAGGCACGACACCGTACGCGTCGCAAGCCGCGTGTGCTCTTTTCT
CAAGCGCAAGTTTTCGAGCTGGAGCGTCGGTTTAAGCAGCAACGCTATCTCTCGGCGCCC
GAGCGCGAACATCTTGCCCAGATCCTGAAACTCACATCAACGCAAGTCAAGATATGGTTC
CAAAACAGACGGTACAAGTGCAAAAGAATGCGGCAGGACAAGACCTTGGAGTTGGCGAGC
ATTGGTCCCCCGAGAAGAGTTGCTGTCCCTGTGCTAGTGAGAGATGGGAAACCTTGCCTT
GGCGGTCCCGGAGCAGGAATCCAAAACTCACACGCCCCGTACTCAGCGCCCTACAACGTG
ACAGTCACCCCATACCACAATTACCCAAACTCGTACAACTCGTGCGGGTACAACTCGTAT
TCGCACCCGAACCCCAACGCCTACGCACCAGGTGCCGCTGCAGCTGCTGCAGTCGCCGGG
GCCGCTGCTGCCGCCTACGGCACTGCAGTGTCCGCTGGGTATAATGGGTTTTCGGGACCG
GGTATGTCAGGGGGACAAGGAGGACCCATGACGGGTTACCCCACTCCAACACTTCACCCA
CAACATCCAAACCCCGTCGCCATGGGTTCATCTCCGTTTGGCACATCGACGATGTCACCA
GGGCAGGTTGGGCAACCTGGACTTCACCCCACACCTAGTGACTACATGTACAAGCTTGGT
TTGTGCACTTGA

InterProScan

PANTHER
NKX-2.5 (IPR033629) - T[59-246] 2.3E-77
SUPERFAMILY
Homeobox-like_sf (IPR009057) - T[83-151] 8.98E-24
ProSiteProfiles
Homeobox_dom (IPR001356) - T[90-150] 20.099
SMART
Homeobox_dom (IPR001356) - T[92-154] 3.0E-24
CDD
Homeobox_dom (IPR001356) - T[93-151] 1.40224E-23
Pfam
Homeobox_dom (IPR001356) - T[93-149] 1.1E-19
PRINTS
Homeobox_metazoa (IPR020479) - T[114-125] 1.9E-6 - T[129-139] 1.9E-6 - T[139-148] 1.9E-6
ProSitePatterns
Homeobox_CS (IPR017970) - T[125-148] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NKX26_HUMAN 73.171 % 171 2.77E-51
NKX25_HUMAN 65.116 % 158 7.0E-46
NKX23_HUMAN 65.306 % 156 6.97E-45