Aniseed - Transcript Card

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S152.g01204.01.t

Possible name(s)

ATP6V1C1; ATP6V1C2

Gene model

Phfumi.CG.MTP2014.S152.g01204

Location

S152 [35,124 / 37,148]

Sequences

Amino acid sequence

Length: 385

>Phfumi.CG.MTP2014.S152.g01204.01.p
MSEYWIISAPGDKTPQQTYERLHKATIGQGGANNLSHNYKFHIPELRVGTLDSLIGLTDD
LSKLDIFAEGVCRKVSAYMGDVLEEQRDKLSSNLKAGDMTLPNYMHHFQWNMAKYPVKQS
LKSLSEIISKVVNQVDVDLRTKSQAYNNLKSNLQNMERKATGSLLLRNLRQIVKKDDFIL
DSEYLQTILVAVPVSQFDEWDKNYETLTEFVAPRSSRLLYQDEEYGLFAVTIFRKVFEEF
KYNCGRNKFFVREFQYSEQDMHSDKDQLNKLASDKKKMLGPLLRWLKVNFSEAFIAWMHV
KALRVFVESVLRYGLPVNFQAAVLEPQKKQRKRLRETLNSLYGDLDSTGLGAVDEETLPG
LSLGMQEYYPYVFYKVVLDFDSRSL

Nucleotide sequence

Length: 1,158

>Phfumi.CG.MTP2014.S152.g01204.01.t
ATGTCTGAATATTGGATTATTAGTGCACCGGGTGACAAAACACCTCAGCAAACCTATGAA
AGGCTACATAAAGCCACCATAGGACAAGGTGGTGCCAATAATCTTTCCCATAATTACAAG
TTTCACATTCCCGAACTGAGAGTGGGAACGCTTGATTCACTTATCGGGCTTACTGATGAT
TTGAGTAAACTGGATATCTTTGCTGAAGGTGTTTGTCGAAAAGTGTCAGCCTATATGGGA
GATGTTTTGGAGGAACAAAGGGACAAACTTTCAAGCAACTTAAAAGCTGGAGATATGACT
TTGCCAAACTACATGCACCACTTTCAATGGAACATGGCTAAGTATCCTGTGAAACAATCA
CTGAAGAGCCTTTCTGAAATTATTTCAAAAGTTGTAAATCAAGTTGATGTTGATCTCAGA
ACCAAATCCCAGGCTTACAACAATCTAAAATCTAATTTGCAGAACATGGAAAGAAAAGCA
ACTGGAAGCTTGCTATTAAGAAACTTAAGACAAATTGTAAAGAAGGATGATTTTATCTTG
GATTCTGAGTACCTGCAGACTATACTGGTAGCCGTGCCAGTGTCACAGTTTGATGAATGG
GACAAAAACTATGAAACTCTCACTGAATTTGTAGCACCAAGATCTTCAAGACTGCTTTAT
CAGGATGAAGAGTATGGGTTGTTTGCTGTTACAATTTTCAGGAAGGTCTTTGAGGAGTTT
AAATACAATTGTGGCAGAAACAAGTTTTTTGTTCGTGAATTCCAGTACAGTGAACAGGAC
ATGCACAGTGACAAGGACCAACTTAACAAACTTGCTTCTGACAAAAAGAAAATGCTGGGA
CCTTTACTTCGATGGCTTAAAGTCAATTTTAGTGAAGCTTTTATTGCTTGGATGCATGTG
AAGGCTCTAAGGGTGTTTGTTGAATCAGTGCTAAGATATGGCCTTCCAGTAAACTTTCAG
GCTGCTGTTTTGGAACCACAAAAGAAACAAAGAAAAAGACTGCGTGAGACACTAAACAGT
CTGTATGGGGATCTTGACAGCACTGGTTTGGGGGCAGTTGATGAAGAAACTCTACCAGGA
CTTTCACTTGGAATGCAAGAATATTATCCTTACGTCTTTTACAAAGTTGTGCTGGACTTC
GACAGTCGATCTTTATGA

InterProScan

PANTHER	ATPase_V1-cplx_csu (IPR004907) - T[1-379] 1.0E-165
SUPERFAMILY	Vac_ATP_synth_c_sf (IPR036132) - T[1-376] 2.88E-139
CDD	ATPase_V1-cplx_csu (IPR004907) - T[4-376] 1.5106E-179
Pfam	ATPase_V1-cplx_csu (IPR004907) - T[4-372] 2.1E-151

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
VATC1_HUMAN	59.682 %	476	1.21E-168
VATC2_HUMAN	46.37 %	385	3.71E-132