- Region 'REG00000651' >
- Transcript 'Haaura.CG.MTP2014.S2...' >
- Transcript 'Moocci.CG.ELv1_2.S13...' >
- Transcript 'Cisavi.CG.ENS81.R16....' >
- Transcript 'Phfumi.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S1545.g03855.01.t
Possible name(s)
CDX1; CDX2; CDX4
Gene model
Location
S1545 [18,171 / 21,407]
Amino acid sequence
Length: 225
>Phfumi.CG.MTP2014.S1545.g03855.01.p
QNPHAVPGAQLSGIPHGAMVQQRRPYEWINKNAYQNSQPQQGKTRTKDKYRVVYSDHQRL
ELEKEFRYSRYITIRRKAELAGQLCLSERQVKIWFQNRRAKERKANKKNTDKGDQSEPGE
QDTIDDDERNTPMTSSPPLLHDQVGHLAPAEQEERYAPQVDVLHEMHEPRESAMAQMTYS
YLPHSYTGSLDVKPIVSEEPLITSPTVDVTHTQSVTNAATESHLT
Nucleotide sequence
Length: 678
>Phfumi.CG.MTP2014.S1545.g03855.01.t
CAGAACCCCCACGCTGTTCCTGGAGCCCAACTATCAGGCATTCCTCATGGGGCTATGGTG
CAGCAGCGAAGGCCATACGAATGGATAAACAAAAACGCTTATCAAAACAGCCAGCCACAA
CAAGGCAAAACTCGCACAAAGGACAAGTATAGAGTCGTGTACTCAGACCACCAGAGACTA
GAACTGGAAAAGGAATTTCGTTACAGCCGTTACATTACAATACGACGAAAAGCTGAACTC
GCTGGGCAGCTGTGCCTAAGCGAACGCCAAGTAAAAATTTGGTTTCAAAACCGACGTGCG
AAAGAGCGCAAGGCAAACAAGAAAAACACCGATAAAGGCGACCAATCAGAACCAGGTGAA
CAGGACACCATTGACGATGATGAAAGAAACACACCTATGACATCGTCACCACCGTTATTA
CACGACCAGGTGGGCCACCTCGCGCCAGCCGAACAAGAGGAACGCTACGCCCCTCAGGTG
GATGTGCTTCACGAAATGCACGAACCGCGTGAGAGCGCTATGGCGCAAATGACGTACAGC
TATCTGCCACACAGCTACACAGGTAGTTTGGACGTAAAACCAATTGTGAGCGAAGAGCCG
CTGATAACGTCACCAACTGTTGACGTTACGCACACACAAAGTGTTACAAATGCTGCAACA
GAAAGTCATCTTACATAG
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[33-107] 2.52E-22 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[45-105] 19.807 |
| SMART |
Homeobox_dom (IPR001356) - T[47-109] 2.3E-21 |
| Pfam |
Homeobox_dom (IPR001356) - T[49-104] 1.3E-19 |
| CDD |
Homeobox_dom (IPR001356) - T[49-104] 1.87979E-19 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[69-80] 2.2E-6 - T[84-94] 2.2E-6 - T[94-103] 2.2E-6 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[80-103] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CDX1_HUMAN | 68.085 % | 133 | 2.69E-38 |
| CDX2_HUMAN | 78.409 % | 133 | 1.07E-37 |
| CDX4_HUMAN | 55.652 % | 117 | 7.47E-32 |