Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Phfumi.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S15544.g09333.01.t

Possible name(s)

SMCHD1

Location

S15544 [910 / 3,798]

Sequences

Amino acid sequence

Length: 281

>Phfumi.CG.MTP2014.S15544.g09333.01.p
YLLKYLDQPLEAPVSERIEFQPHYDTLIKSGIYEYYASEGHINPLPFAFAELIDNALAAT
VKNKGPRCIELSLHINESNGKHALCVYDNGEGMSSRQLNNWAIYRLSKFNRKERHERVNL
VENESDIEGKSDDRQQDGAPKSLNSDISWFGVGGKQAIFFIGNATRIITKPRGSCDVHEF
TMSKDEFRRKERNREAIFAGYIRNRKPGDSSHVAKSDKMTREFISKEGNEGFTRIIVSGL
SPSHVSFVKHGFNIWTRQLAHIYHYYIHGPEGNSAISRKRK

Nucleotide sequence

Length: 843

>Phfumi.CG.MTP2014.S15544.g09333.01.t
TACCTTCTTAAGTATCTTGACCAACCTCTGGAAGCTCCCGTATCAGAAAGGATTGAGTTC
CAACCTCATTATGACACATTAATAAAAAGTGGAATATATGAGTATTATGCCAGTGAAGGC
CACATCAATCCGCTACCTTTTGCTTTTGCTGAATTGATTGATAATGCATTGGCAGCCACA
GTGAAAAACAAAGGACCCCGATGCATTGAGTTAAGTTTGCACATTAATGAGTCAAATGGA
AAACACGCTCTGTGTGTTTATGACAACGGAGAGGGTATGTCGTCACGGCAACTCAACAAC
TGGGCAATTTACCGACTTTCAAAATTTAACAGAAAAGAGCGGCATGAGAGAGTAAATCTG
GTTGAAAACGAAAGTGACATTGAGGGTAAATCTGACGATAGACAACAAGATGGTGCTCCC
AAGTCACTCAACAGCGACATCTCATGGTTCGGAGTTGGTGGAAAGCAAGCAATATTTTTC
ATTGGAAATGCAACAAGAATTATCACCAAGCCTAGGGGATCATGTGATGTTCATGAATTT
ACGATGTCAAAAGATGAGTTTCGTCGCAAAGAAAGAAATAGAGAAGCGATATTTGCTGGA
TACATCAGAAACAGAAAGCCGGGTGATTCTTCACATGTTGCTAAGTCAGACAAGATGACT
CGTGAGTTTATTAGCAAAGAAGGAAATGAAGGGTTCACAAGAATTATCGTAAGCGGGCTG
TCTCCTTCCCATGTCAGCTTCGTAAAACATGGATTTAATATTTGGACAAGGCAACTGGCG
CATATTTACCATTACTACATTCACGGACCCGAAGGCAACTCTGCCATTTCAAGAAAACGA
AAA

InterProScan

Gene3D
HATPase_C_sf (IPR036890) - T[14-249] 1.6E-11
SUPERFAMILY
HATPase_C_sf (IPR036890) - T[15-110] 1.24E-9
CDD
HATPase_C (IPR003594) - T[48-100] 4.87756E-4

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SMHD1_HUMAN 53.381 % 311 5.38E-97