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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...' > 
  2. Clone 'ciad065k01' > 
  3. Transcript 'Cisavi.CG.ENS81.R16....' > 
  4. Transcript 'KH2012:KH.L164.8.v2....' > 
  5. Transcript 'Phfumi.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S15544.g09333.02.t

Possible name(s)

SMCHD1

Gene model

Phfumi.CG.MTP2014.S15544.g09333

Location

S15544 [952 / 3,825]

Sequences

Amino acid sequence

Length: 276

>Phfumi.CG.MTP2014.S15544.g09333.02.p
SERIEFQPHYDTLIKSGIYEYYASEGHINPLPFAFAELIDNALAATVKNKGPRCIELSLH
INESNGKHALCVYDNGEGMSSRQLNNWAIYRLSKFNRKERHERVNLVENESDIEGKSDDR
QQDGAPKSLNSDISWFGVGGKQAIFFIGNATRIITKPRGSCDVHEFTMSKDEFRRKERNR
EAIFAGYIRNRKPGDSSHVAKSDKMTREFISKEGNEGFTRIIVSGLSPSHVSFVKHGFNI
WTRQLAHIYHYYIHGPEGNSAISRKRKNVGALDVDM

Nucleotide sequence

Length: 828

>Phfumi.CG.MTP2014.S15544.g09333.02.t
TCAGAAAGGATTGAGTTCCAACCTCATTATGACACATTAATAAAAAGTGGAATATATGAG
TATTATGCCAGTGAAGGCCACATCAATCCGCTACCTTTTGCTTTTGCTGAATTGATTGAT
AATGCATTGGCAGCCACAGTGAAAAACAAAGGACCCCGATGCATTGAGTTAAGTTTGCAC
ATTAATGAGTCAAATGGAAAACACGCTCTGTGTGTTTATGACAACGGAGAGGGTATGTCG
TCACGGCAACTCAACAACTGGGCAATTTACCGACTTTCAAAATTTAACAGAAAAGAGCGG
CATGAGAGAGTAAATCTGGTTGAAAACGAAAGTGACATTGAGGGTAAATCTGACGATAGA
CAACAAGATGGTGCTCCCAAGTCACTCAACAGCGACATCTCATGGTTCGGAGTTGGTGGA
AAGCAAGCAATATTTTTCATTGGAAATGCAACAAGAATTATCACCAAGCCTAGGGGATCA
TGTGATGTTCATGAATTTACGATGTCAAAAGATGAGTTTCGTCGCAAAGAAAGAAATAGA
GAAGCGATATTTGCTGGATACATCAGAAACAGAAAGCCGGGTGATTCTTCACATGTTGCT
AAGTCAGACAAGATGACTCGTGAGTTTATTAGCAAAGAAGGAAATGAAGGGTTCACAAGA
ATTATCGTAAGCGGGCTGTCTCCTTCCCATGTCAGCTTCGTAAAACATGGATTTAATATT
TGGACAAGGCAACTGGCGCATATTTACCATTACTACATTCACGGACCCGAAGGCAACTCT
GCCATTTCAAGAAAACGAAAAAACGTTGGAGCGTTGGACGTTGATATG

InterProScan

Gene3D
HATPase_C_sf (IPR036890) - T[1-236] 1.6E-11
SUPERFAMILY
HATPase_C_sf (IPR036890) - T[2-96] 1.83E-9
CDD
HATPase_C (IPR003594) - T[34-86] 6.70806E-4

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SMHD1_HUMAN 55.385 % 305 1.15E-94