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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S1590.g03902.01.t

Possible name(s)

ACTA1; ACTA2; ACTC1

Gene model

Phfumi.CG.MTP2014.S1590.g03902

Location

S1590 [1,331 / 3,101]

Sequences

Amino acid sequence

Length: 132

>Phfumi.CG.MTP2014.S1590.g03902.01.p
MATAASCTSLEKSYELPDGQVITIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGT
TMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYD
EAGPSIVHRKCF

Nucleotide sequence

Length: 399

>Phfumi.CG.MTP2014.S1590.g03902.01.t
ATGGCAACCGCAGCATCATGCACCTCTCTTGAAAAGAGCTACGAGCTTCCCGACGGTCAA
GTTATCACCATCGGAATGGAATCCGCCGGCATCCACGAGACGACCTACAACTCCATCATG
AAGTGTGACATCGACATCCGCAAGGATCTCTACGCCAACAACGTCCTCTCCGGAGGAACC
ACCATGTACCCTGGTATCGCCGACAGAATGCAGAAGGAGATCACCGCTCTTGCTCCCAGC
ACCATGAAGATCAAGATCATCGCTCCTCCAGAGAGGAAATACTCCGTCTGGATCGGTGGT
TCCATCCTTGCATCCTTGTCCACCTTCCAGCAGATGTGGATCACCAAACAGGAGTACGAT
GAAGCAGGACCCTCCATCGTCCACAGAAAGTGCTTCTAA

InterProScan

SMART
Actin (IPR004000) - T[1-132] 5.3E-5
PANTHER
Actin (IPR004000) - T[1-131] 6.1E-83
Pfam
Actin (IPR004000) - T[28-132] 2.0E-46
ProSitePatterns
Actin_CS (IPR004001) - T[113-121] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ACTA_HUMAN 86.577 % 258 1.93E-87
ACTS_HUMAN 86.577 % 259 1.73E-87
ACTC_HUMAN 86.577 % 258 1.93E-87