- Transcript 'Phmamm.CG.MTP2014.S5...' >
- Transcript 'Cisavi.CG.ENS81.R156...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Phmamm.CG.MTP2014.S8...' >
- Transcript 'Phfumi.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S162.g01250.02.t
Possible name(s)
ABCC1; ABCC3; ABCC4
Gene model
Location
S162 [16,500 / 25,209]
Amino acid sequence
Length: 787
>Phfumi.CG.MTP2014.S162.g01250.02.p
STSLKSKMYSDAKVKQRQAKKGNFVSRNTYWWLNDLFREGSKKDLEEHDLYGLNENNMSS
NICDTLERNWNAEIKRSQIKGIRPRLARAVWKTYALRWSAIGFMAIFKTIRLSQKSIAST
TTGQIVNLGATDVIRFDQVFVVVAWSNALRIPVVLLFANGAQHLAQSLISFKRIETFLLL
GEIHQPEKEDVGSGNDSDSPRVVFKSFTGTWEEVNLANTEKENGKPGVTLRNINIQINKS
VLLAVIGPVGSGKSSLLHAVLGELPAKSGQVSVQGRVAYVGQIPWVFSGTVKENILFGEK
YEPLRYLQVIKACALQNDLESLENGDETLVGERGVTLSGGQKARVNLARAAYRRKTDIIL
LDDPLSAVDATVANHLFHQCICGFLSDKVEYVAAVKDEEIKRQGSIGWKSYWKYLSNNKL
TLVLVIIIMPVNQSLMVLCDWWLSIWATRANLGSANATSAPANTTSANPATSPVDNQFYI
YVFAGITAGFVVTTLLRGALQMYHLVASGKDLHNKMLKAILKVPIRFFDTNPVGRILNRF
SKDMGQVDEILPWLFSDVSIIWGQIVSVVILAIVVNYFVILPLIPIIIYFFWLRRYYIKT
SRDIKRIEGRITDVDAGQVGLAVTYALQLMASFQWGVRLSAEVENHIGIVGRTGAGKSSL
LSCLFRLNDLSSGKLIIDDVDVSKIGLTALRSSISAIPQDPILFAGTLRNNLDPFSSYTD
EELWSALERVQMKESIEIFPSKLEMELAESGSNFSVGQRQLICLARAILGKNKILAIDEA
TANVDIR
Nucleotide sequence
Length: 2,364
>Phfumi.CG.MTP2014.S162.g01250.02.t
TCAACAAGTCTCAAAAGCAAAATGTATTCGGATGCCAAAGTAAAGCAACGTCAAGCTAAA
AAAGGAAATTTTGTATCCAGGAATACCTACTGGTGGCTGAATGACTTATTTCGCGAAGGA
AGCAAGAAAGATCTCGAAGAGCATGACCTTTACGGATTGAACGAAAATAACATGTCATCG
AACATATGTGACACGCTTGAACGAAATTGGAACGCAGAAATCAAAAGAAGCCAAATTAAA
GGCATCAGACCAAGACTTGCCCGGGCTGTTTGGAAAACTTATGCATTGCGATGGAGCGCA
ATCGGCTTTATGGCCATTTTTAAGACAATCCGCCTTAGTCAGAAATCTATAGCCAGCACA
ACTACAGGACAAATTGTCAACCTTGGCGCGACTGATGTCATACGGTTTGATCAGGTGTTT
GTCGTCGTGGCTTGGAGTAACGCGTTGCGCATTCCCGTCGTGTTACTTTTTGCCAACGGA
GCTCAGCATCTCGCCCAATCACTCATTAGCTTCAAAAGGATTGAAACGTTTTTACTTCTG
GGTGAAATACATCAACCCGAGAAAGAAGATGTTGGCAGTGGAAATGACAGCGATTCGCCA
AGGGTCGTGTTCAAAAGTTTTACTGGCACCTGGGAAGAGGTCAATCTTGCTAACACCGAA
AAAGAAAATGGAAAACCCGGGGTCACACTGAGGAATATCAACATCCAAATTAATAAATCG
GTTCTTCTCGCGGTCATTGGGCCAGTTGGGTCAGGAAAGTCATCTCTTCTACACGCGGTT
CTAGGGGAGTTGCCAGCCAAATCAGGTCAAGTTTCAGTCCAAGGCAGAGTTGCTTATGTT
GGACAGATTCCGTGGGTTTTCTCAGGAACTGTGAAAGAAAATATTCTCTTTGGGGAGAAG
TACGAACCACTCCGCTATCTGCAAGTCATCAAGGCTTGTGCATTGCAAAACGACTTGGAG
TCGCTGGAGAATGGGGATGAGACACTGGTGGGTGAGCGAGGGGTCACTCTGAGCGGGGGC
CAGAAAGCAAGGGTGAATCTTGCCCGAGCCGCATACCGTAGGAAAACCGACATCATCTTG
CTAGACGACCCATTAAGTGCAGTGGATGCGACTGTGGCCAACCATCTATTTCACCAATGC
ATTTGTGGCTTTCTTAGTGACAAAGTTGAATATGTAGCAGCTGTCAAAGATGAGGAGATA
AAAAGGCAAGGAAGCATCGGTTGGAAGTCATACTGGAAGTATTTATCAAACAACAAACTG
ACTCTTGTACTTGTGATCATCATTATGCCTGTTAACCAATCGTTGATGGTTCTTTGTGAT
TGGTGGCTCTCTATATGGGCGACGAGGGCGAATCTTGGATCAGCCAACGCGACGTCTGCA
CCTGCAAATACAACATCTGCAAATCCAGCAACTAGCCCCGTTGACAACCAGTTTTACATT
TATGTTTTTGCTGGTATTACCGCCGGTTTTGTCGTCACCACCTTACTTCGTGGCGCGTTA
CAGATGTATCATCTAGTGGCATCAGGAAAAGATTTGCACAACAAAATGCTCAAAGCCATT
CTTAAAGTTCCCATAAGATTTTTTGACACCAACCCAGTAGGTAGAATTTTAAACCGCTTC
TCGAAGGATATGGGTCAGGTAGATGAAATTCTTCCTTGGCTCTTCTCTGATGTTTCGATA
ATTTGGGGACAAATCGTTTCTGTAGTGATTTTAGCTATTGTTGTAAATTACTTCGTAATT
TTACCGCTCATACCAATCATCATTTACTTCTTTTGGCTGAGGCGCTACTACATCAAAACT
TCCCGTGACATAAAGCGAATAGAGGGTCGAATCACGGATGTTGACGCTGGTCAGGTGGGA
CTGGCTGTGACGTACGCTCTTCAGTTGATGGCATCGTTCCAGTGGGGAGTCAGATTGAGC
GCAGAAGTCGAAAATCATATTGGGATTGTTGGTCGAACTGGAGCAGGAAAAAGTTCTCTT
CTATCTTGTCTCTTTCGACTAAACGATTTAAGCTCCGGAAAATTAATTATAGACGACGTG
GATGTTTCAAAGATAGGACTTACTGCCTTGCGCTCCTCCATTTCCGCCATACCTCAAGAT
CCAATCTTATTCGCTGGAACATTACGAAACAATCTTGATCCGTTTTCGTCATACACTGAT
GAGGAGTTGTGGTCTGCATTAGAAAGGGTTCAGATGAAGGAATCGATCGAAATCTTTCCG
TCCAAATTGGAAATGGAGTTGGCTGAATCCGGTTCCAACTTCAGCGTTGGTCAACGTCAG
CTCATCTGCCTCGCTAGGGCGATTTTGGGAAAGAACAAAATTCTTGCGATTGACGAAGCA
ACAGCCAACGTTGATATCAGGTAA
| PANTHER |
ABCC4 (IPR030240) - T[14-106] 1.7E-236 - T[100-141] 1.7E-236 - T[138-390] 1.7E-236 - T[389-609] 1.7E-236 - T[613-645] 1.7E-236 - T[646-786] 1.7E-236 |
| ProSiteProfiles |
ABC_transporter-like (IPR003439) - T[214-428] 17.24 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[225-391] 1.61E-37 - T[636-786] 8.62E-43 |
| Pfam |
ABC_transporter-like (IPR003439) - T[230-365] 1.1E-17 - T[638-782] 2.6E-26 |
| SMART |
AAA+_ATPase (IPR003593) - T[239-484] 2.0E-5 - T[643-787] 1.5 |
| ProSitePatterns |
ABC_transporter_CS (IPR017871) - T[337-351] . |
| Gene3D |
ABC1_TM_sf (IPR036640) - T[408-630] 2.0E-17 |
| SUPERFAMILY |
ABC1_TM_sf (IPR036640) - T[411-652] 5.62E-27 |
| ProSiteProfiles |
ABC1_TM_dom (IPR011527) - T[431-614] 18.364 |
| Pfam |
ABC1_TM_dom (IPR011527) - T[464-606] 1.7E-20 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MRP1_HUMAN | 59.574 % | 181 | 3.7E-47 |
| MRP3_HUMAN | 38.387 % | 187 | 5.15E-49 |
| MRP4_HUMAN | 47.959 % | 250 | 8.2E-70 |