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TRANSCRIPT CARD

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  1. Clone 'ma321h01'
  2. Transcript 'KH2012:KH.C11.102.v2...'
  3. Clone 'cilv017e07'
  4. Clone 'citb035f09'
  5. Transcript 'Phfumi.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S162.g01250.03.t

Possible name(s)

ABCC1; ABCC3; ABCC4

Location

S162 [16,506 / 23,831]

Sequences

Amino acid sequence

Length: 367

>Phfumi.CG.MTP2014.S162.g01250.03.p
MGVAVAFLWTFIGAASLVSLGIVALTIFIQIFFGRLNGRYRSKTALRTDKRIRLMNDLVS
AMRVVKMFAWEQPYEKLILNIRSDEIKKILKTSYLRAYNIATTYIFSRLMIFLTIVVYVY
LGGQLSSPKVFVVVAWSNALRIPVVLLFANGAQHLAQSLISFKRIEKENGKPGVTLRNIN
IQINKSVLLAVIGPVGSGKSSLLHAVLGELPAKSGQVSVQGRVAYVGQIPWVFSGTVKEN
ILFGEKYEPLRYLQVIKACALQNGEVANMGSFNELQASGTDFTELLKRDEKEEVRANAKN
EDPILFAGTLRNNLDPFSSYTDEELWSALERVQMKDVGQRQLICLARAILGKNKILAIDE
ATANVDI

Nucleotide sequence

Length: 1,101

>Phfumi.CG.MTP2014.S162.g01250.03.t
ATGGGTGTGGCCGTCGCGTTTCTGTGGACTTTCATTGGAGCCGCTTCACTTGTGTCGTTG
GGAATCGTGGCTTTAACGATATTCATCCAGATCTTTTTCGGTCGGTTAAACGGAAGATAT
CGGTCCAAGACAGCGCTGCGCACTGACAAAAGGATACGACTGATGAACGATCTTGTGTCA
GCCATGCGAGTTGTGAAGATGTTTGCGTGGGAGCAACCGTATGAAAAGCTGATTTTAAAT
ATTCGAAGCGACGAAATCAAGAAAATATTGAAGACGTCGTACCTACGAGCTTACAACATT
GCGACGACGTACATATTCTCCCGCCTAATGATTTTCCTCACGATTGTAGTTTACGTGTAC
CTTGGCGGGCAGTTGTCTTCTCCCAAGGTGTTTGTCGTCGTGGCTTGGAGTAACGCGTTG
CGCATTCCCGTCGTGTTACTTTTTGCCAACGGAGCTCAGCATCTCGCCCAATCACTCATT
AGCTTCAAAAGGATTGAAAAAGAAAATGGAAAACCCGGGGTCACACTGAGGAATATCAAC
ATCCAAATTAATAAATCGGTTCTTCTCGCGGTCATTGGGCCAGTTGGGTCAGGAAAGTCA
TCTCTTCTACACGCGGTTCTAGGGGAGTTGCCAGCCAAATCAGGTCAAGTTTCAGTCCAA
GGCAGAGTTGCTTATGTTGGACAGATTCCGTGGGTTTTCTCAGGAACTGTGAAAGAAAAT
ATTCTCTTTGGGGAGAAGTACGAACCACTCCGCTATCTGCAAGTCATCAAGGCTTGTGCA
TTGCAAAACGGCGAAGTCGCTAATATGGGATCGTTCAATGAGTTGCAAGCCAGTGGCACT
GACTTCACGGAACTGCTAAAGCGTGACGAAAAAGAAGAAGTTAGAGCAAACGCAAAGAAT
GAGGATCCAATCTTATTCGCTGGAACATTACGAAACAATCTTGATCCGTTTTCGTCATAC
ACTGATGAGGAGTTGTGGTCTGCATTAGAAAGGGTTCAGATGAAGGACGTTGGTCAACGT
CAGCTCATCTGCCTCGCTAGGGCGATTTTGGGAAAGAACAAAATTCTTGCGATTGACGAA
GCAACAGCCAACGTTGATATC

InterProScan

Gene3D
ABC1_TM_sf (IPR036640) - T[1-166] 3.9E-9
ProSiteProfiles
ABC1_TM_dom (IPR011527) - T[1-156] 20.212
SUPERFAMILY
ABC1_TM_sf (IPR036640) - T[3-165] 3.66E-16
Pfam
ABC1_TM_dom (IPR011527) - T[3-140] 2.9E-14
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[160-367] 4.75E-24
ProSiteProfiles
ABC_transporter-like (IPR003439) - T[160-367] 8.85
Pfam
ABC_transporter-like (IPR003439) - T[176-363] 2.8E-15

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MRP3_HUMAN 28.715 % 150 9.51E-40
MRP2_HUMAN 30.312 % 153 6.64E-41
MRP4_HUMAN 41.522 % 229 5.29E-67