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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S165.g01264.02.t

Possible name(s)

DNER; SNED1; TENM2

Location

S165 [7,756 / 10,380]

Sequences

Amino acid sequence

Length: 543

>Phfumi.CG.MTP2014.S165.g01264.02.p
MELHYLSFFLFFAACGVILGEDQHTCDPACESDEACVIKHGVGFCQAHVDGLVDVLCQAL
ICINGPCEKVMEMNEHGAYIHPICDCDDGYVGLACDLKCPSCNDNFQVCSVSQDNEAVCE
MAEPADWYCLKDTCLNGGSCNNLTDANENTTLCNCAENYEGMICESLKKGGRQFVPDVLI
DDSVCEPNPCGGDCTCKPSCKHEMGYYCVSEEGYIGKNCDIAIPNVFCTENYIEIEVSNL
FYEEFDKGIGNSFIYVSPNADGTERCIGRIHEDVAVVSKSGSFAAEFSLCKKEICDDTCP
SYLQVRDAAIYTIGQMIHFNIKIVTKQSEVLPEAQFVTTLEKIFLSCSSDRFDSNSVLAT
MATAGCPLSNPVFSFMMTSGMTSTPQSVCGSIQVPRSTACQQIYIHAEILLCLAGDLQVC
ATDSGNNFCLNSARKRRSLEDENVAFAMIGPITIIPGSKGRKIEDLYLQGTKEGIVTFRD
DVIVPDLTGKPNREEFPIMSTPASSDVAYYSPVVLIIGIASFAISCVTMVAFILARLFRS
RDE

Nucleotide sequence

Length: 1,629

>Phfumi.CG.MTP2014.S165.g01264.02.t
ATGGAGCTCCATTATTTAAGTTTTTTCCTTTTCTTTGCTGCTTGCGGAGTGATTCTCGGA
GAAGACCAACACACATGTGATCCAGCCTGCGAATCCGATGAAGCTTGTGTAATCAAACAC
GGAGTGGGCTTTTGTCAAGCACACGTGGACGGATTGGTAGACGTGCTCTGCCAAGCCCTA
ATTTGCATTAACGGGCCGTGTGAAAAAGTGATGGAAATGAACGAACACGGAGCCTACATT
CACCCAATCTGTGACTGCGACGATGGATACGTGGGCTTGGCATGCGACCTAAAATGTCCA
TCCTGCAACGACAATTTCCAAGTTTGCTCGGTTTCCCAAGACAACGAGGCTGTATGTGAA
ATGGCGGAGCCCGCGGATTGGTACTGCTTAAAAGACACTTGTTTGAATGGTGGCTCTTGC
AACAACCTTACCGATGCAAATGAGAATACCACATTGTGCAATTGTGCTGAAAACTACGAA
GGAATGATATGCGAATCGTTGAAAAAAGGAGGCCGACAGTTTGTTCCCGATGTGCTTATA
GACGACAGTGTGTGTGAACCCAACCCATGTGGCGGGGATTGCACATGCAAACCCTCGTGT
AAACACGAAATGGGTTATTACTGCGTAAGCGAAGAAGGATATATTGGCAAAAACTGCGAC
ATCGCGATTCCAAATGTTTTCTGCACCGAGAACTACATTGAAATTGAGGTATCTAATCTC
TTCTACGAAGAGTTCGACAAAGGCATTGGTAACAGCTTTATTTACGTTTCGCCGAACGCG
GACGGCACGGAAAGATGCATCGGTAGGATTCACGAGGATGTCGCCGTAGTCAGCAAGTCG
GGTAGTTTTGCAGCGGAATTCTCACTCTGCAAAAAAGAGATTTGCGACGACACCTGTCCT
TCCTACCTGCAAGTTCGCGATGCTGCTATTTACACGATTGGTCAAATGATCCACTTCAAC
ATCAAGATAGTCACCAAACAGAGCGAGGTCCTTCCCGAGGCTCAATTCGTCACAACGTTA
GAGAAAATCTTTCTTTCTTGCAGCTCGGACAGATTTGACAGCAACAGTGTGCTCGCTACT
ATGGCGACGGCTGGATGTCCTTTGTCCAATCCGGTTTTCTCTTTCATGATGACATCGGGA
ATGACGTCAACCCCGCAGTCTGTGTGCGGTTCGATCCAAGTTCCCCGAAGCACAGCTTGC
CAGCAAATTTACATTCATGCGGAAATTCTACTGTGCCTGGCTGGCGACCTACAGGTTTGT
GCAACCGACAGTGGGAACAACTTCTGCCTCAACTCAGCCCGAAAACGACGATCGCTCGAA
GACGAAAATGTTGCTTTTGCCATGATCGGACCAATCACCATTATTCCCGGATCCAAAGGA
CGCAAAATCGAAGATCTATACTTACAGGGCACCAAGGAAGGCATTGTTACATTCAGAGAT
GACGTCATTGTGCCAGACCTGACGGGGAAACCGAATCGCGAGGAGTTCCCGATCATGTCA
ACACCAGCCAGCAGTGACGTTGCATATTACTCGCCGGTTGTTCTCATCATCGGAATAGCC
TCCTTTGCGATTTCGTGCGTCACAATGGTTGCTTTCATCCTCGCCCGTCTTTTCCGCTCT
CGCGACGAG

InterProScan

SMART
EGF-like_dom (IPR000742) - T[56-96] 0.9 - T[128-165] 0.072 - T[184-220] 250.0
ProSiteProfiles
EGF-like_dom (IPR000742) - T[58-96] 6.537 - T[125-165] 13.41 - T[181-220] 6.571
ProSitePatterns
EGF-like_CS (IPR013032) - T[84-95] . - T[153-164] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value