Aniseed - Transcript Card

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S1788.g04116.01.t

Possible name(s)

CNOT2; CNOT3

Gene model

Phfumi.CG.MTP2014.S1788.g04116

Location

S1788 [8,141 / 15,383]

Sequences

Amino acid sequence

Length: 478

>Phfumi.CG.MTP2014.S1788.g04116.01.p
MLGQSGFSSAFYGQQNSAGVGNRSMNSQPFGRSMSVPGGHITPTSGDNASQINQTRGILP
MSRNTLGGNQMPTSQIGSNLLSSRPGMPSPTRGISPIDLFNMKQSGNRGLPNTAISRTQS
FTSQAMPISAIGSESISQHRQQPLSGSSSVSHIGMSGLNPFNLDQNEFPALAQRTRPIGS
QPASTNSVKGPYVGMLNKQSEHNEFQIHNEDFPALPGAAAMNVMKAVFPEQDGRGDESQN
KFNPLGSLQIGGQVTTDKSNPKQSTTGSQKGIQVFPDNSIKHIPNSMLTDQYGIVGLFAF
IKAAETDPTLVHLALGNDLTTLGLNLNSPDNLYHKFQSPFIRQPCRLQDIDFFVPSEYLT
NAHIRDKLAPIKLNRYGEDLLFYVYYTNPGDVLQLAAAAELYNRDWRYHKEERIWITRAP
GIEPRTKTSTYEQGTYYYFDCQNWRKVAKEFHLEYDKLEERPHLPNLVSLHFNPAQHS

Nucleotide sequence

Length: 1,437

>Phfumi.CG.MTP2014.S1788.g04116.01.t
ATGCTGGGGCAATCTGGATTTTCTTCAGCGTTTTATGGACAACAGAATTCTGCTGGTGTT
GGAAATCGAAGTATGAACTCACAACCATTTGGAAGAAGTATGTCCGTTCCTGGTGGGCAC
ATAACACCAACTAGTGGTGACAATGCAAGCCAAATCAATCAAACCAGGGGCATTTTGCCA
ATGTCACGGAATACTTTGGGAGGAAACCAAATGCCAACATCACAGATTGGAAGCAATTTA
CTTTCTAGTCGACCTGGCATGCCGAGTCCAACAAGAGGGATTTCACCAATTGACTTATTC
AACATGAAACAATCTGGAAATCGGGGTCTTCCTAATACTGCCATATCAAGGACGCAGTCC
TTCACCTCACAGGCCATGCCAATCAGTGCAATAGGAAGTGAAAGCATTTCACAACATCGA
CAGCAACCACTTTCAGGGTCCTCTTCAGTGTCTCACATTGGCATGTCTGGCCTCAACCCA
TTTAATTTGGATCAAAACGAATTTCCTGCCTTGGCTCAACGAACACGACCAATAGGATCA
CAACCAGCTTCCACAAACAGTGTGAAAGGGCCCTACGTTGGAATGTTGAATAAACAAAGT
GAACACAATGAATTTCAAATACACAATGAAGACTTTCCTGCTTTGCCTGGTGCTGCAGCA
ATGAATGTGATGAAGGCTGTTTTTCCGGAACAAGATGGAAGAGGGGATGAATCACAAAAC
AAATTTAATCCGTTAGGAAGTCTTCAGATTGGTGGTCAAGTGACAACAGACAAGTCCAAT
CCAAAACAGTCCACTACAGGTTCTCAGAAGGGAATCCAGGTTTTTCCAGACAATTCAATA
AAGCACATTCCAAATTCCATGCTTACCGATCAGTATGGCATTGTGGGACTTTTTGCTTTC
ATCAAAGCTGCCGAGACTGACCCAACCTTGGTCCATTTGGCTTTGGGTAATGACCTCACC
ACGTTGGGACTTAACCTCAACTCTCCAGACAACCTATACCACAAGTTCCAGTCTCCATTT
ATCAGACAACCATGTCGATTGCAAGATATTGACTTCTTTGTGCCAAGCGAATACTTGACC
AATGCCCATATAAGGGATAAGTTGGCTCCGATTAAACTAAACAGATATGGGGAGGATCTG
CTATTCTATGTTTATTACACAAATCCAGGCGATGTGTTACAACTAGCTGCTGCAGCCGAA
TTATACAACAGGGATTGGCGATATCATAAAGAAGAACGAATTTGGATTACCCGAGCACCG
GGCATTGAACCACGTACGAAAACAAGCACCTATGAGCAAGGGACTTATTATTACTTTGAT
TGCCAAAACTGGAGGAAAGTGGCCAAGGAATTCCACCTTGAATACGACAAGCTTGAAGAG
CGGCCACACCTTCCCAACCTCGTCTCGTTGCATTTTAATCCGGCGCAGCACAGTTGA

InterProScan

Gene3D	CCR4-NOT_su2/3/5_N_sf (IPR038635) - T[282-477] 2.5E-79
Pfam	NOT (IPR007282) - T[336-458] 4.7E-31

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CNOT2_HUMAN	49.296 %	421	1.87E-143