Aniseed - Transcript Card

Transcript 'Phfumi.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S1815.g04158.01.t

Possible name(s)

DLL4; EYS; SNED1

Gene model

Phfumi.CG.MTP2014.S1815.g04158

Location

S1815 [16,416 / 20,260]

Sequences

Amino acid sequence

Length: 441

>Phfumi.CG.MTP2014.S1815.g04158.01.p
NIRGASTCLIVTDSPNQKCDPKCRDPEDCLEMTNGKTMCRYGRIILHFCDSAPCKNGATC
SERKNFIGISVGFRCKCTPEWVGVICDRPKSDACSSNPCMNGCRCMASCRHARGYQCVGR
ETGYIGTNCDIAVISSSGDLQLRIDLPFIGQCGTTMGNDSSVAGGIVFENRIWVNRDTDL
RLDMPVPVLDFSCVYARQYDVMSSLQPLMDPNVVKVVRSGSFRANIEMCKVPSCPERCPT
LYQVLDEAVYTIGEMIHVRIDVETAQALLDQPELVLAVKKIFLSCSSDIFMPGFAEIVSE
ASRCPGNPGFPFSLSSGQIASPRAVCLSFQVPKAANCVRFFIHARLFLCAFDDLQRCDQH
SNFAYCNPRSKRSSEGHDVIGDDVAYTFIGPIHVLPGSRGRRIEQLFIDGQPGNVVTFTG
DKDPGDFPTSPPTNLQHKGKN

Nucleotide sequence

Length: 1,323

>Phfumi.CG.MTP2014.S1815.g04158.01.t
AATATTAGGGGCGCCTCAACTTGTTTGATTGTCACGGATTCTCCGAACCAGAAGTGCGAC
CCCAAGTGTCGTGATCCAGAGGACTGCCTTGAAATGACGAATGGTAAAACCATGTGCAGG
TACGGAAGAATCATCCTGCATTTCTGCGATTCGGCCCCTTGCAAGAACGGTGCGACCTGC
TCCGAGAGAAAGAATTTTATCGGAATTAGCGTCGGTTTCAGGTGCAAGTGCACCCCAGAA
TGGGTAGGAGTTATCTGTGATCGACCAAAGTCTGATGCATGCTCGTCAAACCCATGCATG
AACGGCTGCAGATGCATGGCTTCGTGCAGACACGCTAGAGGTTATCAGTGCGTCGGAAGA
GAGACCGGATATATCGGGACCAACTGCGATATTGCTGTAATTTCAAGCAGCGGCGATCTT
CAGTTGAGGATAGATCTTCCTTTTATCGGGCAGTGCGGGACTACGATGGGGAACGACTCT
TCTGTGGCAGGAGGAATCGTTTTCGAGAACCGGATCTGGGTGAACCGGGACACAGATTTG
AGACTCGATATGCCCGTTCCGGTTCTTGATTTTAGTTGTGTGTACGCTCGTCAGTATGAC
GTCATGTCGTCATTGCAACCCCTAATGGATCCAAATGTTGTAAAAGTGGTGCGAAGTGGA
AGCTTCAGGGCCAACATCGAAATGTGTAAGGTTCCATCCTGTCCCGAGAGATGCCCAACT
CTATACCAAGTGTTGGACGAAGCAGTGTACACCATTGGTGAAATGATCCACGTTCGAATC
GATGTCGAAACCGCCCAGGCGCTACTTGATCAGCCCGAGCTTGTACTGGCTGTGAAGAAA
ATTTTTCTCTCCTGTTCGTCCGACATTTTTATGCCCGGATTCGCCGAAATTGTCTCTGAA
GCATCTCGCTGCCCAGGAAATCCCGGTTTTCCCTTCTCGCTAAGTTCCGGACAAATCGCT
TCCCCTCGTGCGGTTTGTCTTTCGTTCCAAGTTCCTAAAGCTGCCAACTGCGTGCGCTTT
TTCATTCACGCTCGATTGTTTCTGTGCGCCTTCGACGACTTGCAGCGATGTGACCAACAC
TCCAACTTCGCATACTGTAACCCGCGATCTAAGCGCTCATCTGAAGGTCATGACGTCATT
GGTGATGACGTTGCTTACACGTTTATCGGCCCTATCCACGTTTTGCCTGGATCCAGGGGT
CGGAGAATCGAACAACTGTTTATCGATGGTCAGCCTGGCAACGTGGTTACGTTTACAGGT
GATAAGGATCCGGGCGACTTTCCTACGTCTCCTCCGACAAACCTACAGCACAAAGGTAAA
AAC

InterProScan

ProSiteProfiles	EGF-like_dom (IPR000742) - T[45-87] 14.323
SMART	EGF-like_dom (IPR000742) - T[48-87] 5.7E-4 - T[93-130] 170.0
Pfam	EGF-like_dom (IPR000742) - T[49-83] 1.6E-4
ProSitePatterns	EGF-like_CS (IPR013032) - T[75-86] .
ProSiteProfiles	ZP_dom (IPR001507) - T[93-364] 11.394

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value