- Clone 'cieg009o13' >
- Clone 'AHC0AAA169YG09' >
- Clone 'cign054g21' >
- Clone 'cien162444' >
- Transcript 'Phfumi.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S1837.g04184.01.t
Possible name(s)
RPS27A; UBB; UBC
Gene model
Location
S1837 [7,495 / 10,007]
Amino acid sequence
Length: 533
>Phfumi.CG.MTP2014.S1837.g04184.01.p
MQIFVKTLTGKTITLEVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI
Nucleotide sequence
Length: 1,599
>Phfumi.CG.MTP2014.S1837.g04184.01.t
ATGCAGATCTTTGTGAAAACGTTGACTGGAAAAACAATAACCCTAGAGGTTGAGGCCTCC
GACTCGATCGAAAATGTGAAAGCTAAGATCCAGGATAAAGAAGGAATCCCACCCGATCAG
CAGCGTTTGATCTTTGCTGGAAAGCAGCTTGAAGATGGGCGCACGTTGAGTGACTACAAT
ATCCAGAAGGAATCCACCCTTCACTTGGTGTTGCGACTTCGTGGTGGAATGCAAATCTTT
GTAAAAACATTGACTGGCAAAACCATTACTCTTGAAGTTGAAGCCTCGGACAGCATTGAA
AATGTGAAAGCTAAAATCCAAGACAAAGAAGGTATTCCACCCGATCAACAGCGTTTGATC
TTTGCTGGCAAGCAGCTTGAAGATGGGCGCACTTTGAGCGACTATAATATCCAGAAGGAG
TCCACCCTTCACTTGGTGTTGCGACTTCGTGGTGGAATGCAAATCTTTGTGAAAACATTG
ACTGGCAAAACCATTACTCTTGAAGTTGAAGCCTCGGATAGCATTGAAAATGTGAAAGCT
AAAATCCAAGACAAAGAAGGTATTCCACCAGACCAGCAGCGTTTGATTTTCGCTGGCAAG
CAGCTTGAAGATGGGCGCACTTTGAGCGACTATAATATCCAGAAGGAATCCACCCTTCAC
TTGGTGTTGCGACTTCGTGGTGGAATGCAAATCTTTGTGAAAACATTGACTGGCAAAACC
ATTACTCTTGAAGTTGAAGCCTCGGACAGCATTGAAAATGTGAAAGCTAAAATCCAAGAC
AAAGAAGGTATCCCACCAGATCAGCAGCGTTTGATCTTTGCTGGCAAGCAGCTTGAAGAT
GGGCGCACTTTGAGCGACTATAATATCCAGAAGGAATCCACCCTTCACTTGGTGTTGCGA
CTTCGTGGTGGAATGCAAATCTTTGTGAAAACATTGACTGGCAAAACCATTACTCTTGAA
GTTGAAGCCTCGGACAGCATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAAGGTATC
CCACCAGATCAGCAGCGTTTGATCTTTGCTGGCAAGCAGCTTGAAGATGGGCGCACTTTG
AGCGACTATAATATCCAGAAGGAATCCACCCTTCACTTGGTGTTGCGACTTCGTGGTGGA
ATGCAAATCTTTGTGAAAACATTGACTGGCAAAACCATTACTCTTGAAGTTGAAGCCTCG
GACAGCATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAAGGTATCCCACCAGATCAG
CAGCGTTTGATCTTTGCTGGCAAGCAGCTTGAAGATGGGCGCACTTTGAGCGACTACAAT
ATCCAGAAGGAATCCACCCTTCACTTGGTGTTGCGACTTCGTGGTGGAATGCAAATCTTT
GTAAAAACGTTGACTGGCAAAACCATTACTCTTGAAGTTGAAGCCTCAGACAGCATTGAA
AATGTGAAAGCTAAAATCCAAGACAAAGAAGGTATTCCACCAGACCAGCAGCGTTTGATT
TTCGCTGGTAAGCAGCTTGAAGATGGGCGCACATTGAGTGACTACAACATCCAAAAGGAA
TCTACTCTTCATCTGGTCTTGCGTCTTCGTGGAGGAATC
| SMART |
Ubiquitin_dom (IPR000626) - T[1-72] 6.3E-35 - T[77-148] 6.3E-35 - T[153-224] 6.3E-35 - T[229-300] 6.3E-35 - T[305-376] 6.3E-35 - T[381-452] 6.3E-35 - T[457-528] 6.3E-35 |
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[1-76] 8.91E-33 - T[76-152] 2.69E-33 - T[152-228] 2.49E-33 - T[228-304] 2.69E-33 - T[304-380] 3.73E-33 - T[380-456] 3.73E-33 - T[456-532] 2.9E-33 |
| ProSiteProfiles |
Ubiquitin_dom (IPR000626) - T[1-76] 30.343 - T[77-152] 30.343 - T[153-228] 30.343 - T[229-304] 30.343 - T[305-380] 30.343 - T[381-456] 30.343 - T[457-532] 30.343 |
| Pfam |
Ubiquitin_dom (IPR000626) - T[3-74] 1.7E-32 - T[79-150] 1.7E-32 - T[155-226] 1.7E-32 - T[231-302] 1.7E-32 - T[307-378] 1.7E-32 - T[383-454] 1.7E-32 - T[459-530] 1.7E-32 |
| PRINTS |
Ubiquitin (IPR019956) - T[11-31] 6.6E-37 - T[32-52] 6.6E-37 - T[53-74] 6.6E-37 |
| ProSitePatterns |
Ubiquitin_CS (IPR019954) - T[27-52] . - T[103-128] . - T[179-204] . - T[255-280] . - T[331-356] . - T[407-432] . - T[483-508] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RL40_HUMAN | 97.403 % | 155 | 3.04E-45 |
| UBB_HUMAN | 96.943 % | 443 | 5.97E-156 |
| UBC_HUMAN | 97.186 % | 1028 | 0 |