- Clone 'AHC0AAA121YJ19' >
- Clone 'cien116447' >
- Clone 'cign028n12' >
- Transcript 'Phfumi.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S184.g01331.01.t
Possible name(s)
SALL3
Gene model
Location
S184 [42,600 / 48,288]
Amino acid sequence
Length: 1,170
>Phfumi.CG.MTP2014.S184.g01331.01.p
DCGSSDDLSRQMNVSNLESRLTIPQTENMVQSVENGSVNGDTFCHTDKNRYDESARHTAN
REFANRQAIMSMKDEVTDQEVQSDSFPGEKAEEGELSPMKAQGSGNKQAAECEERLGEFS
EKQLLGQQQRESENGEVDSSDKLEDTKEIEDIKDQVRRLQQQQMCQVQMLNYLHFQLAMV
ASTNQQPQRPAQCFYPGSPQQFSGLNGMQIQNMLANAVASGPGGQPTTPLNGVLPSMANV
LERQFANVELTTKKEASDPEECDERLSESSSSFELKRASSNFAVETKERALDSNDTPLQG
SGYSEDKQQAGFTKHACRYCQKVFGSDSALQIHLRSHTGERPFKCNICANRFSTRGNLKV
HFVRHKTKYPNIEMNSNPVPEYLDNIPTDNGIPYGMSVVPDESDLPGYGSNDGNERDSPC
GDLFEQGRDSDNATLPRNRSDLDLVHFKNPEAENDSSSERSVSLPSINESGFKHGNPALP
FPLFPTQAPTAKDEESRKVVEKIAETPITLESCQAESLEKQSTEKMTATFSASGQLQNRI
PSSETKKLENLVNRIDHGKELEKNECHICRRVLSCQSALKLHYRTHTGERPYKCDLCSRA
FTTRGNLRTHYSSVHRQQLRPSPPQSSASARSSVLQCPLCGSRFMDQQSLQQHMHMHLYI
NSQQQQQQHQQQIARFIAGQQPGIASLPGYPPVTLPSTTSEKERESLATIDNEVPGHRMS
SDQPEDDTSANDEVFEDRSPATSFGARATPDESSNGDLATSPQPQRDTPRKESRDFHING
KMQPSALDLTRSSSKSPSDVLMQGPDVEQNDSRDMGPIKTISNPLSELAHLASSSAIMRP
GGMSMMSLQASPPSEESRHRKMTTSCEICSKPFTCQSALEIHLRSHTKERPYVCRVCERG
FTTKGNLKQHLLTHNITEVDDDMLEPVTSPAAGNSSNESPASSPSMTNGLQTNGLKRPLE
SNQAPPSAKRTYPRHWCHICQKQFSSASSLQIHNRTHTGEKPFACSVCGRAFTTKGNLKV
HMGTHVWGAGGSRRGRRISMDNPLISPWMQNTSNSAANPGLRPRAPQTIPVVPDPTAIYQ
QYAALASAGLMGVKATTDPRFHGNGILNLNNSAAARLLLSQGNGHVTPPGAVPSVGQTLN
AIEAMKANDNKNISAAEWFWKAYQRTQEQV
Nucleotide sequence
Length: 3,510
>Phfumi.CG.MTP2014.S184.g01331.01.t
GATTGCGGCAGTTCAGACGACTTGAGTAGGCAAATGAATGTGAGCAATTTGGAATCACGA
TTAACTATTCCACAAACAGAAAACATGGTGCAAAGTGTCGAAAACGGAAGCGTCAATGGC
GATACTTTTTGCCACACCGACAAAAATCGATATGACGAATCTGCAAGGCACACCGCTAAC
CGAGAGTTTGCCAATCGTCAAGCCATAATGTCAATGAAAGATGAAGTAACTGATCAAGAA
GTTCAATCAGACAGCTTTCCCGGTGAAAAAGCTGAGGAGGGCGAGCTTAGTCCAATGAAA
GCCCAAGGTTCCGGTAATAAGCAAGCGGCCGAATGTGAAGAGAGACTTGGAGAGTTTAGT
GAGAAACAATTACTGGGGCAGCAACAGCGGGAGAGTGAAAATGGTGAAGTTGATTCAAGT
GACAAACTAGAAGACACCAAAGAGATCGAGGACATCAAGGACCAAGTTCGGCGTTTGCAA
CAACAACAAATGTGCCAAGTCCAAATGTTGAACTATCTGCATTTTCAGCTTGCTATGGTT
GCATCAACCAATCAACAGCCCCAACGCCCTGCTCAATGTTTCTATCCCGGGTCACCACAA
CAGTTTTCTGGTTTGAACGGCATGCAAATCCAGAATATGTTGGCTAACGCAGTGGCAAGC
GGGCCTGGTGGGCAACCGACTACACCGTTAAATGGTGTCTTGCCATCCATGGCCAATGTG
CTTGAGCGTCAGTTTGCAAATGTTGAGCTGACGACCAAAAAAGAAGCTTCGGACCCGGAG
GAGTGCGATGAAAGGCTGAGCGAGAGTTCGTCTTCGTTCGAACTAAAACGCGCTTCAAGC
AACTTTGCGGTGGAAACAAAGGAACGTGCTCTCGACAGCAACGATACACCACTGCAAGGT
AGTGGATATAGCGAAGATAAGCAGCAAGCAGGCTTTACAAAGCACGCATGTCGCTACTGT
CAGAAAGTTTTCGGGAGCGACAGTGCGCTACAGATTCACCTACGCTCGCACACAGGCGAG
CGCCCATTCAAGTGCAACATCTGTGCCAATCGCTTCTCAACTAGAGGCAATCTAAAGGTT
CATTTCGTCCGACACAAGACTAAGTATCCGAACATTGAAATGAATTCAAACCCGGTTCCC
GAGTACCTCGACAACATTCCCACCGACAATGGCATACCCTACGGCATGTCTGTAGTTCCC
GACGAATCTGATTTACCCGGCTATGGAAGTAATGACGGAAACGAACGGGATTCCCCTTGC
GGCGACTTGTTCGAGCAGGGTCGCGATAGCGATAATGCCACGTTGCCAAGAAATCGAAGC
GACTTGGACCTAGTTCACTTTAAAAACCCGGAAGCGGAAAACGATAGTTCGAGTGAACGA
AGCGTCTCGCTTCCGTCGATAAACGAAAGTGGCTTTAAGCACGGCAACCCAGCCCTGCCT
TTTCCATTGTTCCCTACACAAGCGCCCACCGCAAAGGACGAGGAAAGCCGTAAGGTCGTC
GAGAAAATCGCGGAGACTCCAATTACGTTGGAAAGCTGCCAAGCAGAGAGCTTGGAGAAA
CAAAGTACAGAAAAGATGACCGCTACGTTTTCAGCTTCTGGGCAGTTGCAAAATCGAATC
CCATCCTCAGAAACGAAAAAATTGGAGAACTTGGTGAATCGAATTGATCATGGCAAGGAG
CTGGAAAAGAACGAATGCCACATTTGCAGACGAGTCCTGAGCTGCCAGAGTGCCCTCAAA
TTGCATTACCGGACTCATACAGGTGAACGTCCTTACAAGTGCGATCTATGCTCGCGTGCT
TTCACAACGCGTGGTAACTTGCGAACCCACTACAGTAGCGTACACAGGCAGCAACTGAGA
CCCTCGCCACCACAGAGCAGCGCCTCGGCTCGGAGCAGTGTACTTCAGTGTCCACTGTGT
GGGAGCCGCTTCATGGACCAGCAATCGCTTCAGCAACACATGCATATGCATTTGTACATT
AATAGCCAACAGCAACAACAACAGCATCAACAGCAAATAGCACGTTTCATCGCCGGTCAG
CAGCCTGGCATCGCCAGCTTACCCGGGTATCCTCCAGTCACTCTTCCGTCAACCACTTCT
GAGAAAGAAAGAGAGAGCCTTGCAACCATCGACAATGAAGTACCTGGCCACCGTATGTCG
AGCGACCAACCAGAAGACGACACGTCAGCTAACGACGAGGTGTTCGAAGACCGATCTCCA
GCAACGAGTTTTGGTGCAAGAGCCACTCCCGACGAGTCTTCCAATGGGGATCTTGCCACG
AGCCCTCAGCCACAGCGCGATACGCCAAGGAAGGAAAGTCGAGACTTCCATATCAACGGG
AAAATGCAACCATCGGCTTTAGATTTGACCCGATCAAGTTCAAAATCGCCGAGCGACGTG
TTAATGCAGGGACCGGACGTCGAGCAAAACGACAGCAGGGACATGGGTCCAATTAAAACC
ATTTCCAACCCGCTAAGCGAATTGGCCCATTTGGCTTCCAGCAGCGCAATTATGCGGCCC
GGGGGAATGTCGATGATGAGCCTTCAAGCGTCTCCACCCAGCGAAGAGTCTCGCCATAGG
AAAATGACCACATCATGTGAGATCTGCAGCAAGCCATTCACATGCCAAAGTGCACTGGAG
ATTCACCTACGAAGTCATACCAAAGAACGCCCGTACGTCTGCCGAGTTTGTGAAAGGGGC
TTTACCACAAAAGGAAACCTTAAACAACACTTGTTGACCCACAACATAACCGAGGTGGAC
GATGATATGCTGGAACCGGTGACAAGCCCCGCAGCTGGCAACTCGTCCAACGAGAGTCCG
GCTAGTTCACCTTCGATGACCAACGGTTTACAAACCAATGGGCTGAAGCGCCCTTTGGAA
TCCAATCAAGCGCCACCGTCGGCCAAAAGGACTTATCCTAGGCATTGGTGTCACATTTGT
CAAAAGCAGTTTTCGTCAGCCAGCTCCCTCCAGATTCACAATCGAACCCACACTGGTGAA
AAGCCGTTTGCCTGCAGTGTGTGTGGAAGAGCTTTTACCACTAAAGGGAATTTAAAAGTT
CATATGGGAACGCATGTGTGGGGTGCTGGCGGTTCAAGAAGAGGCCGAAGAATTTCAATG
GATAATCCTCTTATTTCACCCTGGATGCAAAACACCTCCAACTCTGCTGCCAATCCCGGT
CTTCGACCGCGCGCTCCACAAACCATTCCTGTTGTACCAGACCCAACTGCTATTTACCAG
CAATACGCTGCTCTCGCGTCGGCCGGCCTTATGGGTGTCAAGGCAACCACCGATCCTCGA
TTTCATGGCAATGGAATTTTAAATCTGAACAATTCTGCTGCTGCAAGACTACTGTTGTCA
CAAGGCAACGGTCACGTGACACCGCCGGGCGCAGTTCCTTCAGTCGGACAAACGCTTAAT
GCAATTGAAGCCATGAAAGCAAACGACAACAAAAATATTTCCGCTGCTGAATGGTTTTGG
AAGGCTTATCAGAGAACACAGGAACAGGTA
| SMART |
Znf_C2H2_type (IPR013087) - T[315-337] 0.003 - T[343-365] 0.011 - T[564-586] 4.1 - T[592-615] 3.4E-4 - T[635-657] 9.9E-4 - T[864-886] 0.091 - T[892-914] 4.7E-4 - T[975-997] 0.69 - T[1003-1025] 1.6E-4 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[315-342] 14.711 - T[343-370] 11.136 - T[564-591] 13.131 - T[592-620] 11.635 - T[635-657] 9.951 - T[864-891] 13.671 - T[892-914] 10.679 - T[975-1002] 14.96 - T[1003-1025] 11.801 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[315-365] 1.2E-13 - T[565-611] 7.56E-13 - T[865-914] 4.82E-14 - T[975-1025] 2.91E-16 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[317-337] . - T[345-365] . - T[566-586] . - T[594-615] . - T[637-657] . - T[866-886] . - T[894-914] . - T[977-997] . - T[1005-1025] . |
| Pfam |
Znf_C2H2_type (IPR013087) - T[592-615] 4.2E-4 - T[892-914] 2.2E-4 - T[977-997] 0.0082 - T[1003-1025] 2.3E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SALL1_HUMAN | 44 % | 223 | 3.21E-59 |
| SALL3_HUMAN | 45.405 % | 274 | 7.87E-76 |
| SALL2_HUMAN | 36.623 % | 236 | 5.81E-64 |