- Transcript 'Phfumi.CG.MTP2014.S1...' >
- Transcript 'Phfumi.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S184.g01331.02.t
Possible name(s)
SALL3
Gene model
Location
S184 [42,633 / 48,288]
Amino acid sequence
Length: 1,000
>Phfumi.CG.MTP2014.S184.g01331.02.p
MNVSNLESRLTIPQTENMVQSVENGSVNGEVQSDSFPGEKAEEGELSPMKAQGSGNKQAA
ECEERLGEFSEKQLLGQQQRESENGEVDSSDKLEDTKEIEDIKDQVRRLQQQQMCQVQML
NYLHFQLAMVASTNQQPQRPAQCFYPGSPQQFSGLNGMQIQNMLANAVASGPGGQPTTPL
NGVLPSMANVLERQFANVELTTKKEASDPEECDERLSESSSSFELKRASSNFAVETKERA
LDSNDTPLQGSGYSEDKQQAGFTKHACRYCQKVFGSDSALQIHLRSHTGERPFKCNICAN
RFSTRGNLKVHFVRHKTKYPNIEMNSNPVPEYLDNIPTDNGIPYGMSVVPDESDLPGYGS
NDGNERDSPCGDLFEQGRDSDNATLPRNRSDLDLVHFKNPEAENDSSSERSVSLPSINES
GFKHGNPALPFPLFPTQAPTAKDEESRKVVEKIAETPITLESCQAESLEKQSTEKMTATF
SASGQLQNRIPSSETKKLENLVNRIDHGKELEKNECHICRRVLSCQSALKLHYRTHTVAR
FIAGQQPGIASLPGYPPVTLPSTTSEKERESLATIDNEVPGHRMSSDQPEDDTSANDEVF
EDRSPATSFGARATPDESSNGDLATSPQPQRDTPRKESRDFHINGKMQPSALDLTRSSSK
SPSDVLMQGPDVEQNDSRDMGPIKTISNPLSELAHLASSSAIMRPGGMSMMSLQASPPSE
ESRHRKMTTSCEICSKPFTCQSALEIHLRSHTKERPYVCRVCERGFTTKGNLKQHLLTHN
ITEVDDDMLEPVTSPAAGNSSNESPASSPSMTNGLQTNGLKIHNRTHTGEKPFACSVCGR
AFTTKGNLKVHMGTHVWGAGGSRRGRRISMDNPLISPWMQNTSNSAANPGLRPRAPQTIP
VVPDPTAIYQQYAALASAGLMGVKATTDPRFHGNGILNLNNSAAARLLLSQGNGHVTPPG
AVPSVGQTLNAIEAMKANDNKNISAAEWFWKAYQRTQEQV
Nucleotide sequence
Length: 3,000
>Phfumi.CG.MTP2014.S184.g01331.02.t
ATGAATGTGAGCAATTTGGAATCACGATTAACTATTCCACAAACAGAAAACATGGTGCAA
AGTGTCGAAAACGGAAGCGTCAATGGCGAAGTTCAATCAGACAGCTTTCCCGGTGAAAAA
GCTGAGGAGGGCGAGCTTAGTCCAATGAAAGCCCAAGGTTCCGGTAATAAGCAAGCGGCC
GAATGTGAAGAGAGACTTGGAGAGTTTAGTGAGAAACAATTACTGGGGCAGCAACAGCGG
GAGAGTGAAAATGGTGAAGTTGATTCAAGTGACAAACTAGAAGACACCAAAGAGATCGAG
GACATCAAGGACCAAGTTCGGCGTTTGCAACAACAACAAATGTGCCAAGTCCAAATGTTG
AACTATCTGCATTTTCAGCTTGCTATGGTTGCATCAACCAATCAACAGCCCCAACGCCCT
GCTCAATGTTTCTATCCCGGGTCACCACAACAGTTTTCTGGTTTGAACGGCATGCAAATC
CAGAATATGTTGGCTAACGCAGTGGCAAGCGGGCCTGGTGGGCAACCGACTACACCGTTA
AATGGTGTCTTGCCATCCATGGCCAATGTGCTTGAGCGTCAGTTTGCAAATGTTGAGCTG
ACGACCAAAAAAGAAGCTTCGGACCCGGAGGAGTGCGATGAAAGGCTGAGCGAGAGTTCG
TCTTCGTTCGAACTAAAACGCGCTTCAAGCAACTTTGCGGTGGAAACAAAGGAACGTGCT
CTCGACAGCAACGATACACCACTGCAAGGTAGTGGATATAGCGAAGATAAGCAGCAAGCA
GGCTTTACAAAGCACGCATGTCGCTACTGTCAGAAAGTTTTCGGGAGCGACAGTGCGCTA
CAGATTCACCTACGCTCGCACACAGGCGAGCGCCCATTCAAGTGCAACATCTGTGCCAAT
CGCTTCTCAACTAGAGGCAATCTAAAGGTTCATTTCGTCCGACACAAGACTAAGTATCCG
AACATTGAAATGAATTCAAACCCGGTTCCCGAGTACCTCGACAACATTCCCACCGACAAT
GGCATACCCTACGGCATGTCTGTAGTTCCCGACGAATCTGATTTACCCGGCTATGGAAGT
AATGACGGAAACGAACGGGATTCCCCTTGCGGCGACTTGTTCGAGCAGGGTCGCGATAGC
GATAATGCCACGTTGCCAAGAAATCGAAGCGACTTGGACCTAGTTCACTTTAAAAACCCG
GAAGCGGAAAACGATAGTTCGAGTGAACGAAGCGTCTCGCTTCCGTCGATAAACGAAAGT
GGCTTTAAGCACGGCAACCCAGCCCTGCCTTTTCCATTGTTCCCTACACAAGCGCCCACC
GCAAAGGACGAGGAAAGCCGTAAGGTCGTCGAGAAAATCGCGGAGACTCCAATTACGTTG
GAAAGCTGCCAAGCAGAGAGCTTGGAGAAACAAAGTACAGAAAAGATGACCGCTACGTTT
TCAGCTTCTGGGCAGTTGCAAAATCGAATCCCATCCTCAGAAACGAAAAAATTGGAGAAC
TTGGTGAATCGAATTGATCATGGCAAGGAGCTGGAAAAGAACGAATGCCACATTTGCAGA
CGAGTCCTGAGCTGCCAGAGTGCCCTCAAATTGCATTACCGGACTCATACAGTAGCACGT
TTCATCGCCGGTCAGCAGCCTGGCATCGCCAGCTTACCCGGGTATCCTCCAGTCACTCTT
CCGTCAACCACTTCTGAGAAAGAAAGAGAGAGCCTTGCAACCATCGACAATGAAGTACCT
GGCCACCGTATGTCGAGCGACCAACCAGAAGACGACACGTCAGCTAACGACGAGGTGTTC
GAAGACCGATCTCCAGCAACGAGTTTTGGTGCAAGAGCCACTCCCGACGAGTCTTCCAAT
GGGGATCTTGCCACGAGCCCTCAGCCACAGCGCGATACGCCAAGGAAGGAAAGTCGAGAC
TTCCATATCAACGGGAAAATGCAACCATCGGCTTTAGATTTGACCCGATCAAGTTCAAAA
TCGCCGAGCGACGTGTTAATGCAGGGACCGGACGTCGAGCAAAACGACAGCAGGGACATG
GGTCCAATTAAAACCATTTCCAACCCGCTAAGCGAATTGGCCCATTTGGCTTCCAGCAGC
GCAATTATGCGGCCCGGGGGAATGTCGATGATGAGCCTTCAAGCGTCTCCACCCAGCGAA
GAGTCTCGCCATAGGAAAATGACCACATCATGTGAGATCTGCAGCAAGCCATTCACATGC
CAAAGTGCACTGGAGATTCACCTACGAAGTCATACCAAAGAACGCCCGTACGTCTGCCGA
GTTTGTGAAAGGGGCTTTACCACAAAAGGAAACCTTAAACAACACTTGTTGACCCACAAC
ATAACCGAGGTGGACGATGATATGCTGGAACCGGTGACAAGCCCCGCAGCTGGCAACTCG
TCCAACGAGAGTCCGGCTAGTTCACCTTCGATGACCAACGGTTTACAAACCAATGGGCTG
AAGATTCACAATCGAACCCACACTGGTGAAAAGCCGTTTGCCTGCAGTGTGTGTGGAAGA
GCTTTTACCACTAAAGGGAATTTAAAAGTTCATATGGGAACGCATGTGTGGGGTGCTGGC
GGTTCAAGAAGAGGCCGAAGAATTTCAATGGATAATCCTCTTATTTCACCCTGGATGCAA
AACACCTCCAACTCTGCTGCCAATCCCGGTCTTCGACCGCGCGCTCCACAAACCATTCCT
GTTGTACCAGACCCAACTGCTATTTACCAGCAATACGCTGCTCTCGCGTCGGCCGGCCTT
ATGGGTGTCAAGGCAACCACCGATCCTCGATTTCATGGCAATGGAATTTTAAATCTGAAC
AATTCTGCTGCTGCAAGACTACTGTTGTCACAAGGCAACGGTCACGTGACACCGCCGGGC
GCAGTTCCTTCAGTCGGACAAACGCTTAATGCAATTGAAGCCATGAAAGCAAACGACAAC
AAAAATATTTCCGCTGCTGAATGGTTTTGGAAGGCTTATCAGAGAACACAGGAACAGGTA
| SMART |
Znf_C2H2_type (IPR013087) - T[265-287] 0.003 - T[293-315] 0.011 - T[514-536] 4.1 - T[729-751] 0.091 - T[757-779] 4.7E-4 - T[833-855] 1.6E-4 |
| Pfam |
Znf_C2H2_type (IPR013087) - T[265-287] 0.013 - T[757-779] 1.9E-4 - T[833-855] 1.9E-5 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[265-292] 14.711 - T[293-320] 11.136 - T[514-541] 9.494 - T[729-756] 13.671 - T[757-779] 10.679 - T[833-855] 11.801 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[265-315] 1.01E-13 - T[730-779] 3.93E-14 - T[818-855] 1.5E-12 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[267-287] . - T[295-315] . - T[516-536] . - T[731-751] . - T[759-779] . - T[835-855] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SALL1_HUMAN | 78.261 % | 171 | 2.37E-43 |
| SALL3_HUMAN | 45.364 % | 211 | 8.34E-56 |
| SALL2_HUMAN | 34.824 % | 173 | 2.97E-44 |