Aniseed - Transcript Card

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S18.g00333.01.t

Possible name(s)

RPS3A

Gene model

Phfumi.CG.MTP2014.S18.g00333

Location

S18 [69,487 / 73,180]

Sequences

Amino acid sequence

Length: 268

>Phfumi.CG.MTP2014.S18.g00333.01.p
MAVGKNKRLTKGGKKGGKKKIVDPFSKKDWYDVKAPAMFKHRQIGKTLVSRTVGTKIAAD
GLRGRVFECNQADLHGDESTYRKMRLIVEDIQGKHCLTNFHGMLLTRDKLCSMIKKWQTL
IEASVDVSTTDGYKMRMFCIGFTHKRNNQIKKTSYAQHAQVMNIRAKMVEIMTREVTMGD
LRDLVNKLIPDSIAKDIEKACQGIYPLHDVHIRKVKILKKPKLDIGRLMEMHGEGSSKSA
PTKSGDDTGSKVDRAVGDSYEPPVQASV

Nucleotide sequence

Length: 807

>Phfumi.CG.MTP2014.S18.g00333.01.t
ATGGCTGTAGGAAAGAATAAGCGCCTTACGAAAGGAGGCAAAAAGGGTGGAAAGAAGAAG
ATCGTCGATCCGTTCTCCAAGAAGGATTGGTACGATGTGAAGGCCCCTGCTATGTTCAAG
CACCGCCAAATTGGCAAAACTTTGGTGTCTAGGACTGTTGGAACCAAAATTGCTGCTGAT
GGTTTAAGGGGACGTGTCTTCGAATGCAACCAGGCTGATCTTCATGGCGATGAGTCAACA
TACAGAAAGATGCGCTTGATTGTGGAGGATATTCAGGGCAAACATTGCCTCACAAACTTC
CATGGTATGCTTCTTACAAGAGACAAGTTGTGCTCGATGATTAAGAAGTGGCAGACCCTG
ATTGAAGCATCGGTGGATGTTTCCACCACTGATGGGTACAAGATGAGAATGTTTTGCATT
GGTTTCACACACAAGCGCAACAACCAAATCAAGAAGACCTCCTATGCTCAGCATGCACAG
GTCATGAACATTCGTGCAAAAATGGTGGAAATAATGACTCGGGAAGTTACCATGGGTGAC
CTGCGTGACCTTGTCAACAAACTTATCCCGGATTCCATTGCCAAAGACATTGAGAAGGCC
TGCCAGGGAATCTACCCTCTGCATGATGTGCATATTCGCAAAGTGAAGATTCTCAAGAAA
CCAAAGCTTGACATTGGTCGGCTGATGGAAATGCATGGAGAAGGCAGCAGCAAATCAGCA
CCCACAAAGAGTGGCGACGACACAGGATCCAAGGTTGATCGCGCAGTCGGTGACAGCTAT
GAACCTCCAGTCCAAGCATCGGTATAA

InterProScan

Hamap	Ribosomal_S1/3_euk (IPR027500) - T[1-268] 39.659
SMART	Ribosomal_S3Ae (IPR001593) - T[16-221] 3.5E-134
Pfam	Ribosomal_S3Ae (IPR001593) - T[16-221] 1.0E-90

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RS3A_HUMAN	74.627 %	401	7.48E-143