Aniseed - Transcript Card

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S19401.g09682.01.t

Possible name(s)

TNPO1; TNPO2; XPO1

Gene model

Phfumi.CG.MTP2014.S19401.g09682

Location

S19401 [2 / 2,778]

Sequences

Amino acid sequence

Length: 354

>Phfumi.CG.MTP2014.S19401.g09682.01.p
QVRLVMISRMAKPEEVLVVENEQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYVDTER
IMTEKIHNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIRDLLALCEQKRGK
DNKAIIASNIMYVVGQYPRFLRAHWRFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQK
CRRHFVQMQAGEVMPFIEEILSNISTIICDLQPQQVHTFYEAVGFMISAQSDQVVQEHLI
EKYMLLPNQVWDSIIQKATKDVDVLKDPATVKQLGSILKTNVRACKAVGHYFVVQLGRIY
LDMLNVYKCLSENISAAIMQNGEGVMKQPLIRSMRTVKKETLKLISGWVSRPQT

Nucleotide sequence

Length: 1,310

>Phfumi.CG.MTP2014.S19401.g09682.01.t
CAGGTGCGTTTGGTGATGATAAGCCGAATGGCCAAACCTGAGGAGGTTTTGGTTGTGGAA
AATGAACAAGGAGAGGTTGTACGAGAGTTTATGAAAGACACCGATTCGATCAACTTATAC
AAGAACATGAGGGAAACCCTTGTGTATCTCACCCATTTGGACTATGTGGACACCGAAAGA
ATTATGACAGAGAAAATCCATAATCAGGTAAATGGAACTGAATGGTCATGGAAGAACCTA
AACACACTTTGCTGGGCTATAGGGAGTATCAGTGGTGCAATGCACGAGGAAGATGAAAAG
CGATTTCTCGTCACAGTTATAAGAGATTTATTAGCCCTCTGTGAACAAAAGCGAGGAAAG
GATAACAAGGCAATCATAGCTTCCAACATTATGTACGTTGTTGGGCAATACCCACGATTC
CTGCGTGCCCATTGGCGATTCCTTAAAACTGTTGTCAACAAACTGTTTGAATTTATGCAT
GAAACCCATGATGGAGTGCAGGACATGGCGTGTGACACCTTCATCAAGATCGCTCAGAAA
TGTCGCCGTCATTTTGTGCAGATGCAAGCTGGTGAAGTCATGCCCTTCATTGAGGAAATC
CTGTCAAACATTAGTACAATCATCTGTGACCTTCAACCACAACAGGTGCACACATTTTAT
GAAGCTGTTGGTTTCATGATAAGTGCGCAGAGTGATCAAGTAGTACAAGAACATCTCATC
GAGAAATACATGCTACTGCCCAACCAGGTATGGGACAGTATAATACAGAAGGCAACCAAA
GACGTCGATGTTCTTAAAGACCCAGCCACAGTGAAACAGCTTGGAAGCATCTTAAAGACC
AATGTTCGAGCATGCAAAGCTGTGGGTCATTACTTTGTAGTTCAGCTTGGTCGAATCTAC
TTGGACATGTTGAATGTGTACAAATGTTTGAGCGAGAACATTTCCGCTGCCATAATGCAG
AACGGTGAAGGAGTTATGAAGCAACCTCTGATTCGAAGCATGCGTACAGTGAAAAAGGAA
ACCCTTAAGTTAATATCTGGATGGGTCAGCCGTCCACAGACCTAGAAATGGTCGCAGAAA
ACTTCGTTCCACCACTGCTTGAGGCAGTTTTACTCGATTACAAAACCAATGTTCCAGCAG
CACGGGAACCTGAAGTGCTCAGTACAATGGCGACGATAGTGAACAAACTGGAAGCTGCCA
TTACCAAGGAAATACCGCAAATATTTGATGCAGTGTTCGAATGTACATTAGAGATGATCA
ACAAAGACTTTGAGGAGTTCCCTGAATACAGAACCAACTTCTTTTTGCTG

InterProScan

Gene3D	ARM-like (IPR011989) - T[1-354] 1.6E-181
SUPERFAMILY	ARM-type_fold (IPR016024) - T[4-295] 4.16E-40 - T[294-352] 7.48E-12
Pfam	CRM1_C_dom (IPR014877) - T[295-351] 6.1E-16

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
XPO1_HUMAN	91.738 %	688	0