- Transcript 'Cisavi.CG.ENS81.R2.7...' >
- Transcript 'KH2012:KH.C4.737.v1....' >
- Transcript 'KH2012:KH.C8.71.v1.A...' >
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- Transcript 'Phfumi.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S198.g01368.01.t
Possible name(s)
COL14A1; COL6A5; VIT
Gene model
Location
S198 [2,776 / 13,875]
Amino acid sequence
Length: 572
>Phfumi.CG.MTP2014.S198.g01368.01.p
MQGLCGQPGPAGLPGPDGIPGTDGADGARGPQGVQGPRGERGEPGDRGENGVPGEQGFPG
RDGLRGERGPEGPQGERGFKGEKGEPSDVPGRPGIQGNRGEKGDAGADGSDGTDGEQGVP
GVQGSQGRTGPRGPPGELDLAQLRPIIAEIVRELLPAAPAQEPPNTCQEYPVDVTFLVDG
SDSIGRDEFDSVKDWILLAVDRFKPGMRSIPLHVDVVQYSERSRMEVHQNIENNTNEIED
RVRSIDQMRSGTKTYTAIDFVNTEVVPEMRDGSFKILITMTDGDASDDRNEAAINDARAN
FHMMFSVGVGDKVDNEELLDFSSNGHVFNVGDFAALEGIIANIVENTCAGIDAILAEAGE
PVVTTVVPTVPPGRGDDTSPGCIDAMTDLAFIIDGSSSVGMNGFSLLQEFLRNVVSGFHN
VGNDGTQVAMIQYTDKAHLEFDFSQTTNKQAVLDAIDNLAFRSGNTETGEAIEFAHALYN
DIEGSRDSRKVAVVITDGRSQDDVKIPAEELRLAGAKIFAIGVGEAELVELEEIASSPLT
EFIFSVDDYSAIATIQEMLVEKICIAARGTYR
Nucleotide sequence
Length: 2,742
>Phfumi.CG.MTP2014.S198.g01368.01.t
CAGTTCAGCAGCGATATTGAATACCCTGTTCAACTTCAATCATTTGAAGATTACACAAAC
CCAGCATCGTCTAAGAATTTGCTGGCTTCGATCATGGACACGTTAAACTCGTTGCGTTTC
CTCGGCGAAGGTTCCTTTCTTAACAAAGCTCTTAACTCGTCGGTGGAGCATTTCAGCAGC
CAACCTCGACCCGACCCGATCCTGGATGATATTTCTCCTTCCACACCACGAAAGGTACTG
ATTTTAATGACAAACGGAAAAAGTCACCCGGATGTTACAATGGATGACATTGACGCGTCC
ATTACTGCTCTTGCCGAAGCCGGGGTTGTCGTCTACCCTGTGTCTGTCACACGGGAATGC
CACGGCGTTCAAAGTGTTGCGTGGAACGAAGGTCTCTGCCCGGATACTGTTACGCTTAAC
AGCCTGGCCAAAGTGGGAAGGGAAGCTGGGTCAAGCTTCATGGAAATGACGTCACATGAC
ACCCCTACGGAACTCATCAACGCACTGCAGTGCCCTGACTCTCGTCCTGCCCCTATTCTA
GGACCGTCTTGCAACAACTGCACCTGTGAATGCGAGGGAGAGCCTGGCGAGAAAGGCGAA
GTTGGCCCCGAGGGACCACGAGGACTAAAAGGAGAAGAGCAAAGGTTTCTTGTTTAGGGT
GATCGAGGAGAAAAGGGTGATATTGGACCACCGGGTATTGACGGGATTCATGGAGATAAA
GGTGTTGAAGGAGAGAAAGGCGATCAGGGGCTAAAGGGTGAACCTGGCATTGACGGACTT
TGGGGAGACAAGGGCGAAAGGGGCGAAACAGGACCAAAAGGAGAAGTGGGTGACGACGGA
ATACAAGGTCCGAAGGGCAACAAGGGAGACGAAGGTGATGATGGTGAACAGGGTATTGAG
GGTCCCAGGGGTCCTAAAGGAGAAAAGGGAGAAGGCGTCAAGGGAGACAAAGGTGATGAC
GGCATTGATGGTCCGGATGGACCTCAGGGCCCTAAAGGAGATCTAGGACCAGAGGGAGAC
AAGGGAATGCAAGGTCTTTGTGGCCAGCCAGGACCTGCTGGATTACCGGGCCCGGATGGA
ATTCCCGGTACTGATGGAGCTGATGGTGCTCGGGGTCCACAAGGTGTTCAAGGACCAAGA
GGAGAACGTGGAGAGCCAGGCGACAGGGGCGAGAACGGCGTCCCTGGCGAACAAGGCTTC
CCTGGACGGGATGGTCTGCGTGGAGAAAGAGGACCGGAGGGACCACAGGGCGAGCGTGGA
TTCAAAGGAGAGAAGGGTGAACCGTCAGACGTTCCAGGCAGACCAGGCATTCAAGGCAAC
CGTGGTGAAAAGGGTGATGCCGGGGCTGACGGTTCGGATGGAACTGATGGGGAGCAGGGC
GTTCCCGGGGTTCAAGGTTCACAGGGTCGGACAGGTCCCCGCGGGCCGCCAGGCGAACTC
GATCTCGCTCAACTCCGACCAATCATCGCTGAGATTGTGCGGGAACTTTTACCAGCAGCA
CCTGCACAAGAACCGCCAAACACATGTCAGGAATACCCAGTCGACGTTACTTTCCTCGTC
GACGGAAGCGACTCAATCGGTCGAGATGAGTTTGATAGTGTCAAGGACTGGATTCTTCTG
GCTGTGGATCGGTTTAAGCCAGGAATGCGTTCAATCCCTCTACACGTCGACGTTGTTCAG
TACTCGGAACGTAGCCGCATGGAAGTTCATCAAAACATCGAAAACAACACTAACGAAATC
GAAGACCGAGTTAGAAGCATTGACCAGATGCGCTCTGGCACCAAGACTTACACTGCCATT
GATTTTGTCAATACCGAGGTCGTTCCCGAAATGCGTGATGGTTCTTTCAAAATTCTTATC
ACTATGACGGACGGGGATGCCAGTGATGACCGCAACGAAGCCGCCATTAATGATGCAAGG
GCAAATTTCCACATGATGTTTTCTGTTGGCGTTGGCGATAAAGTAGACAACGAAGAGTTG
TTAGATTTCAGCAGTAACGGCCACGTCTTCAATGTTGGTGATTTTGCTGCGTTGGAAGGC
ATTATCGCCAACATTGTGGAAAACACATGTGCTGGTATCGACGCAATACTCGCAGAGGCT
GGAGAGCCCGTGGTGACAACCGTTGTTCCAACCGTACCCCCGGGTCGCGGTGATGATACA
AGCCCGGGATGTATCGACGCCATGACAGACCTGGCCTTCATCATTGACGGCAGTTCATCG
GTGGGAATGAACGGATTTTCCCTCCTGCAAGAATTCCTTAGGAACGTTGTTAGCGGCTTC
CACAACGTTGGTAACGACGGAACACAAGTTGCTATGATTCAGTACACGGACAAAGCACAT
TTGGAGTTCGACTTCTCTCAAACGACCAACAAACAAGCTGTCCTCGATGCAATCGACAAC
CTGGCCTTCAGAAGTGGAAACACTGAGACTGGCGAAGCAATCGAGTTTGCCCACGCCTTG
TACAATGACATCGAAGGCAGTCGGGATTCCAGAAAGGTTGCTGTCGTCATCACTGATGGT
AGAAGCCAAGATGACGTCAAAATCCCCGCAGAAGAACTGCGTCTGGCCGGTGCTAAGATC
TTTGCGATCGGCGTGGGTGAAGCGGAACTCGTTGAACTTGAGGAAATTGCTTCGAGTCCC
TTGACTGAATTCATCTTTAGCGTGGACGACTATAGCGCTATAGCAACTATTCAGGAAATG
CTGGTGGAGAAAATCTGCATTGCTGCAAGGGGCACCTACAGA
| Pfam |
Collagen (IPR008160) - T[6-57] 5.6E-9 - T[33-86] 2.4E-10 - T[90-136] 1.8E-7 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[159-351] 9.5E-38 - T[386-570] 2.0E-52 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[163-349] 1.08E-36 - T[382-564] 1.93E-49 |
| SMART |
VWF_A (IPR002035) - T[171-348] 1.4E-21 - T[386-564] 3.6E-44 |
| ProSiteProfiles |
VWF_A (IPR002035) - T[173-343] 23.866 - T[388-563] 30.523 |
| Pfam |
VWF_A (IPR002035) - T[173-340] 7.0E-26 - T[388-557] 5.5E-39 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CO6A5_HUMAN | 28.465 % | 166 | 2.2E-43 |
| COEA1_HUMAN | 42.408 % | 155 | 1.07E-39 |
| VITRN_HUMAN | 28.6 % | 152 | 3.34E-39 |