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  1. Transcript 'KH2012:KH.C1.280.v1....'
  2. Transcript 'KH2012:KH.C3.101.v1....'
  3. Transcript 'Phfumi.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S19.g00343.01.t

Possible name(s)

GAPVD1; RABGEF1; RIN2

Location

S19 [33,309 / 36,922]

Sequences

Amino acid sequence

Length: 353

>Phfumi.CG.MTP2014.S19.g00343.01.p
MIQDFYQAMSDRLISHPVFKQYTNEVEQEGIMDNIEKFLMTRLYRNVFCNDQTDDEIEDL
KVQTRIRNLHWITAAMLDANIDENCPSVTEYTDKAITAIIEMDSKRAPQDKLACITRCSK
NIFEAIKHTKADGSAASADEFLPALIYIILRANPPLLKSNIRYVTRFANPTRVMSGEDAY
YFTNLCCAVSFIENAENGLNASSLSLSQEQFDAYMNGEIPSNTQEVDGPEKKMCPGLRLM
YQNLNDLASLHERTDRLFAEATEMRQGIERHSERIQSEVNKALIRKIPDLDYPLCSDGSM
TDGSSSSSSYNDHRDMEAFAGPPQLNQHSALDDDITSTEHLPAPLLPTVVSHE

Nucleotide sequence

Length: 1,119

>Phfumi.CG.MTP2014.S19.g00343.01.t
ATGACTGTTGTCTTGTAATTTACCAAGCAGGAAGCCACAATCGACGAGCAGTCAGTTATG
ATCCAAGATTTCTATCAAGCCATGAGTGACCGTCTTATTTCCCATCCTGTGTTTAAACAA
TACACAAATGAAGTTGAGCAAGAGGGAATAATGGATAACATCGAAAAGTTTCTTATGACT
CGACTGTATCGAAATGTTTTCTGCAACGATCAAACTGACGATGAAATTGAAGACCTTAAA
GTTCAGACTCGCATTAGAAACCTTCACTGGATCACAGCAGCAATGCTGGATGCAAATATT
GATGAAAACTGTCCAAGCGTCACCGAATATACTGACAAGGCCATAACAGCGATTATTGAA
ATGGATTCAAAAAGAGCTCCTCAGGACAAACTTGCTTGCATTACACGATGCAGCAAAAAT
ATATTTGAAGCAATAAAGCACACAAAGGCTGATGGTTCAGCTGCAAGTGCTGATGAGTTT
TTACCTGCACTCATTTACATAATACTGAGGGCAAATCCACCACTGTTGAAGTCGAACATC
CGATATGTGACGAGGTTTGCGAATCCTACGCGTGTCATGTCTGGAGAAGATGCCTATTAC
TTTACTAACCTGTGCTGTGCCGTTTCTTTCATTGAAAACGCCGAGAACGGATTGAACGCA
TCCAGTCTCTCCCTCAGCCAAGAACAATTCGATGCCTATATGAATGGGGAAATCCCCTCC
AACACACAGGAGGTTGATGGTCCGGAGAAGAAGATGTGCCCTGGTTTAAGACTCATGTAC
CAGAATCTTAATGACCTTGCTTCACTTCACGAAAGGACCGACCGTCTGTTCGCGGAGGCG
ACGGAGATGCGACAAGGAATCGAGCGACATTCGGAGCGGATACAGTCGGAAGTTAACAAA
GCTCTCATCCGCAAAATTCCCGATCTTGACTACCCGCTGTGCAGCGACGGATCAATGACT
GACGGATCCTCTTCGTCTTCGTCTTACAATGACCACAGGGATATGGAGGCTTTTGCTGGT
CCGCCCCAACTCAACCAGCATTCCGCGTTAGATGACGATATAACTTCAACCGAACACTTG
CCCGCTCCGCTTCTACCAACTGTGGTCTCGCATGAGTAG

InterProScan

SUPERFAMILY
VPS9_dom_sf (IPR037191) - T[2-216] 2.75E-59
Gene3D
VPS9_dom_sf (IPR037191) - T[52-227] 4.6E-62
ProSiteProfiles
VPS9 (IPR003123) - T[56-201] 36.97
SMART
VPS9 (IPR003123) - T[91-213] 2.4E-20
Pfam
VPS9 (IPR003123) - T[94-196] 1.5E-27

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RABX5_HUMAN 53.462 % 281 4.97E-89





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