- Transcript 'Phfumi.CG.MTP2014.S4...' >
- Transcript 'Phfumi.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S1.g00009.01.t
Possible name(s)
IRF4; IRF8; IRF9
Gene model
Location
S1 [262,605 / 272,937]
Amino acid sequence
Length: 437
>Phfumi.CG.MTP2014.S1.g00009.01.p
DIAVGEMREGYNNFEPLTHQHQQAMTSSATVVNGYRHPTPNCEPYHVQLQQPDAGVAYNL
SNTSRGMRNGEYVNGASPGQQHSPASPASSTTSNSSGSTARSEPPKRLRYWLIDMIESGT
IPGLQWENRERTVFRIPWKHAGKNNWREEDCRIFKEWAKHRGKWKPGDKLDAATWKTRLR
CALNKLPDIKELKELSNLEGNDPFRVYQLLPEPDKSQETEIWPRKSWSKESPPPHHHGNP
LVDPNYQRRASYDHVMVHSNISHDAVVTSEQQLTADPTHAFSRMKVEDSSPSGYCAVDRH
PLEVAPPPAYADAAQSHLRSRNTSNETAPYEGRRHSGQQRDVKAQMNEARFANGSEVTSS
AANMEADGFENFQNGIDQSLLEDLDSLPIPYEMEIYIRYRGSNVIACHVTEPKGCRVHYG
DANLQHIASATHQLPSA
Nucleotide sequence
Length: 1,311
>Phfumi.CG.MTP2014.S1.g00009.01.t
GACATAGCCGTGGGTGAAATGAGAGAAGGATACAACAATTTTGAGCCTCTAACGCACCAG
CATCAACAGGCCATGACCTCTTCCGCCACCGTTGTGAACGGCTACAGACATCCAACGCCC
AACTGCGAACCTTACCACGTCCAGCTTCAGCAGCCCGACGCCGGCGTTGCTTACAACCTA
TCGAACACTTCTAGGGGCATGAGGAACGGCGAATACGTCAACGGCGCCTCCCCTGGCCAG
CAGCATTCCCCAGCATCCCCGGCATCTTCGACGACCTCGAACAGCAGCGGCAGCACAGCG
CGATCTGAACCGCCGAAGAGACTCCGCTACTGGCTGATTGACATGATTGAGAGCGGCACC
ATTCCCGGCCTGCAGTGGGAAAACCGTGAGAGAACCGTGTTCCGCATTCCGTGGAAACAC
GCTGGCAAAAACAATTGGCGCGAAGAAGATTGCCGCATCTTCAAGGAATGGGCGAAACAT
CGCGGCAAGTGGAAGCCAGGAGACAAACTGGATGCAGCAACATGGAAGACTCGGTTGCGA
TGCGCTCTCAACAAGCTGCCGGATATCAAGGAGCTCAAGGAACTAAGCAACCTGGAAGGG
AACGACCCATTTCGCGTCTATCAACTTCTACCAGAGCCCGACAAAAGCCAAGAGACAGAG
ATTTGGCCGCGGAAATCCTGGAGCAAGGAATCGCCCCCGCCGCATCACCATGGCAACCCT
CTCGTGGATCCGAACTACCAGCGTCGCGCGTCTTACGATCATGTGATGGTTCACTCGAAC
ATCTCACATGACGCAGTCGTGACTTCAGAGCAGCAGCTGACAGCAGACCCGACTCATGCC
TTTAGTCGCATGAAGGTCGAGGACAGCTCCCCTAGTGGATATTGCGCCGTCGACAGGCAC
CCGCTTGAAGTTGCCCCTCCCCCCGCCTACGCCGACGCCGCCCAATCACACCTTCGTTCG
CGCAACACCTCCAACGAGACCGCTCCCTACGAGGGCCGTCGTCACTCGGGCCAGCAGCGT
GACGTCAAAGCTCAAATGAACGAGGCCAGGTTTGCCAATGGCAGTGAGGTCACCAGCTCT
GCGGCTAACATGGAGGCAGACGGGTTTGAGAACTTCCAGAACGGAATCGACCAGTCGCTC
CTCGAGGATTTGGATTCGCTGCCAATTCCGTACGAGATGGAAATCTACATTCGATACCGG
GGCTCCAACGTCATAGCATGTCATGTGACCGAGCCGAAGGGCTGTCGAGTGCATTACGGC
GACGCAAACCTCCAGCATATTGCCAGTGCCACCCACCAACTTCCGAGCGCC
| SMART |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[101-212] 3.0E-52 |
| PANTHER |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[102-425] 8.4E-65 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[103-211] 7.0E-43 |
| ProSiteProfiles |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[105-211] 43.099 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[105-211] 5.8E-39 |
| Pfam |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[107-209] 1.8E-40 |
| PRINTS |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[107-126] 9.0E-24 - T[133-146] 9.0E-24 - T[150-167] 9.0E-24 - T[172-194] 9.0E-24 |
| CDD |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[107-211] 4.3512E-45 |
| ProSitePatterns |
Interferon_reg_fac_CS (IPR019817) - T[126-158] . |
| Pfam |
Interferon_reg_factor-3 (IPR019471) - T[391-428] 1.8E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| IRF8_HUMAN | 54.955 % | 138 | 1.7E-36 |
| IRF4_HUMAN | 55.556 % | 136 | 1.3E-35 |
| IRF9_HUMAN | 47.826 % | 127 | 1.29E-32 |