- Transcript 'KH2012:KH.C1.26.v7.A...' >
- Transcript 'Phfumi.CG.MTP2014.S3...' >
- Transcript 'Phfumi.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S1.g00018.01.t
Possible name(s)
CCT8; CCT8L2; TCP1
Gene model
Location
S1 [403,138 / 405,053]
Amino acid sequence
Length: 337
>Phfumi.CG.MTP2014.S1.g00018.01.p
MAFHVPKAPGFSQMLKDGARHFQGLDEAVYRNIKACGELANTTKTAFGPHGMNKMVINHI
EKLFVTNDAATILKELEVEHPAAKMLVIACQMCEQEVGDGTNFVLIFAGALMTLAEELLR
MGLSVPEVIEGFEQACDKAIELLPNLVCSSVEDLRDVGSVAQALKTPLASKQYGNEDFLA
KLLAEACVSILPPTKIQFSVDNIRVSKLSGCGVNSSCKVSGMVFMRECESDVKTIHNPKV
AVFSCPFDMLNTETKGTVLIKNAKELKSFSTGEEDLIEAQIKAIVDTGVNVIVSGGKVSD
LALHFANKFKLMVVRLNSKWDLRRLCKTINATALPRL
Nucleotide sequence
Length: 1,011
>Phfumi.CG.MTP2014.S1.g00018.01.t
ATGGCGTTTCACGTTCCAAAAGCCCCGGGATTTTCTCAAATGTTAAAGGATGGCGCTCGG
CATTTCCAAGGTTTGGATGAAGCTGTGTACAGAAATATTAAAGCTTGTGGCGAACTTGCA
AATACGACAAAAACTGCATTTGGGCCACATGGAATGAACAAAATGGTCATTAATCACATT
GAAAAGTTGTTTGTTACCAACGATGCTGCAACAATTTTAAAGGAATTAGAGGTAGAACAT
CCTGCAGCAAAAATGCTTGTGATTGCCTGCCAAATGTGTGAACAGGAAGTTGGTGATGGA
ACTAACTTTGTTTTAATATTTGCCGGTGCTCTAATGACCCTAGCTGAGGAATTACTGAGA
ATGGGCCTGTCTGTTCCAGAGGTGATTGAAGGATTTGAACAGGCATGTGACAAAGCTATT
GAGCTGTTACCAAACCTTGTTTGCTCATCCGTAGAAGACTTACGTGATGTAGGAAGTGTT
GCTCAAGCCTTAAAGACCCCTCTTGCGAGCAAACAGTACGGCAATGAAGATTTTCTTGCA
AAATTGCTTGCTGAAGCTTGTGTTTCAATTTTACCGCCTACAAAGATTCAATTCAGCGTT
GATAACATCAGAGTTTCCAAACTTTCTGGCTGTGGCGTCAACTCATCCTGTAAAGTCAGT
GGCATGGTTTTCATGCGAGAGTGCGAAAGTGATGTGAAGACAATTCACAACCCTAAAGTT
GCAGTATTTTCTTGTCCCTTTGATATGCTCAACACAGAAACCAAGGGGACTGTTTTAATC
AAAAATGCAAAGGAACTTAAAAGCTTTAGCACCGGAGAAGAAGATCTAATTGAAGCACAA
ATTAAAGCAATTGTTGATACTGGTGTGAATGTTATTGTTTCTGGAGGGAAAGTGTCAGAC
CTTGCTTTGCATTTTGCCAACAAGTTTAAGCTTATGGTCGTGCGCCTTAACTCCAAGTGG
GACCTTCGAAGACTTTGCAAAACAATCAATGCTACTGCTCTTCCAAGACTG
| Gene3D |
GROEL-like_equatorial_sf (IPR027413) - T[1-192] 1.6E-51 |
| TIGRFAM |
Chap_CCT_theta (IPR012721) - T[11-337] 4.6E-144 |
| SUPERFAMILY |
GROEL-like_equatorial_sf (IPR027413) - T[23-304] 8.5E-41 |
| Pfam |
Cpn60/TCP-1 (IPR002423) - T[39-336] 9.8E-85 |
| PRINTS |
Chaperone_TCP-1 (IPR017998) - T[41-57] 1.8E-13 - T[63-81] 1.8E-13 - T[93-112] 1.8E-13 |
| ProSitePatterns |
Chaperonin_TCP-1_CS (IPR002194) - T[44-56] . - T[65-81] . |
| SUPERFAMILY |
TCP-1-like_intermed_sf (IPR027410) - T[158-260] 1.19E-7 |
| SUPERFAMILY |
GroEL-like_apical_dom_sf (IPR027409) - T[216-336] 7.33E-29 |
| Gene3D |
GroEL-like_apical_dom_sf (IPR027409) - T[221-337] 5.2E-49 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TCPA_HUMAN | 33.333 % | 152 | 1.23E-41 |
| TCPQ_HUMAN | 70.03 % | 467 | 1.57E-163 |
| TCPQL_HUMAN | 29.667 % | 145 | 2.18E-39 |