Aniseed - Transcript Card

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S1.g00019.01.t

Possible name(s)

FSHR; RXFP2; TSHR

Gene model

Phfumi.CG.MTP2014.S1.g00019

Location

S1 [408,390 / 411,290]

Sequences

Amino acid sequence

Length: 276

>Phfumi.CG.MTP2014.S1.g00019.01.p
MNLASLRTNHMLVLNLAVADTLMGIYLIMLGSMSVNYKGRYCSQDLMWRSSNMCAAMGVL
VVLSSETSVLTMVLLTLSRLYAVYRSFMDRVLTFGNQTAAASGQWSGDVAKIAGASSWYQ
FQEILHDHHDHEQTVNIYRYFGYYSAHSVCIPKIYVTPSDNAWGFSLLITVFNFMAFVFV
TSAYVVIYMKSTGKSLTRKKDKTKNRQASKSGKASKQSQADAYAVSAIVLLPINSALNPI
VYSNLIDNFISYFKCKKEEKQRASSIVSATYTTAVN

Nucleotide sequence

Length: 828

>Phfumi.CG.MTP2014.S1.g00019.01.t
ATGAACTTGGCCTCTTTGCGGACAAACCACATGCTAGTGCTGAATCTTGCCGTGGCAGAC
ACACTCATGGGAATCTATCTGATAATGCTGGGATCCATGAGTGTGAACTACAAGGGCCGC
TACTGCTCACAGGACCTGATGTGGCGGTCTAGTAACATGTGTGCTGCGATGGGAGTGCTG
GTTGTTCTGTCCAGTGAGACTTCAGTTCTTACAATGGTGCTCCTGACATTATCGCGTCTT
TACGCTGTATACCGGTCGTTTATGGACCGCGTTTTAACGTTCGGAAATCAGACAGCAGCC
GCGTCCGGACAGTGGAGCGGCGACGTGGCGAAAATCGCCGGGGCATCCTCATGGTACCAG
TTTCAGGAGATTCTCCACGATCACCACGATCACGAACAAACTGTTAACATTTACAGATAC
TTCGGATACTACAGCGCCCACAGTGTGTGCATTCCAAAGATTTACGTCACGCCGTCAGAC
AACGCTTGGGGGTTCTCCCTGTTGATCACAGTGTTCAATTTCATGGCATTTGTTTTCGTG
ACGTCGGCATACGTTGTGATCTACATGAAGTCGACGGGGAAAAGTCTGACACGGAAAAAG
GACAAGACCAAAAACAGACAAGCCTCAAAAAGCGGCAAAGCAAGCAAACAGTCACAAGCT
GACGCCTATGCCGTATCGGCGATTGTCCTCCTGCCAATCAACAGCGCCCTCAACCCAATC
GTCTACTCGAACCTGATTGACAACTTTATAAGTTACTTTAAGTGCAAAAAGGAAGAAAAG
CAGAGGGCCAGTTCTATAGTATCTGCAACCTACACCACAGCTGTAAAC

InterProScan

ProSiteProfiles	GPCR_Rhodpsn_7TM (IPR017452) - T[1-87] 9.96
PANTHER	TSHR/LHCGR/FSHR (IPR034298) - T[7-207] 5.1E-49 - T[216-266] 5.1E-49
PRINTS	GPCR_Rhodpsn (IPR000276) - T[9-30] 5.0E-10 - T[61-83] 5.0E-10 - T[224-250] 5.0E-10

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value