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TRANSCRIPT CARD

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  1. Clone 'M1G7'
  2. Clone 'ma316d16'
  3. Transcript 'Phfumi.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S2066.g04470.01.t

Possible name(s)

EDEM1; EDEM2; EDEM3

Location

S2066 [6,123 / 12,128]

Sequences

Amino acid sequence

Length: 491

>Phfumi.CG.MTP2014.S2066.g04470.01.p
MFVKYLCWLIATLFVQYTTANNDSSTTILNEDELFLNEFWGNYYGEKYRHFPEVDRLKSK
EDAKNMFYFGYDSYMTHAFPQDELNPIDCSGRGPDVLNPSNLNINDVLGNFSLTLVDSLD
SLAVLGNATEFKRAVQIVIDNVNFDLNSTVQVFETNIRVLGSLLASHLIIVDPKQPFGDM
RPRGYENELLDMAHDLAVRLLPAFDSAKYGIPFPRVNLRHGVPNNTLTHTATAGAGSLLL
EFGTLSRLLGDPTFENAARRAVDEIWDRRNEKTGLLGIAIDVNTGKWMGRQSGLGAGVDS
FFEYLLKSYILFGEERDLEMFNEALQNIKDHLRRGRTHCNSGMGDPPIYVNVDLSSGNII
NTWVDSLQAFLPGLLVLNGDIEEAICCHALYYTIWKKFDALPERFNWHLKLPDVQFYPLR
PELIESTYLLYRATKNPFYLHVGREILDSIELHARTECGYASLHNVVDKSQEDRMESFFL
SETCKYLYLVS

Nucleotide sequence

Length: 1,473

>Phfumi.CG.MTP2014.S2066.g04470.01.t
ATGTTTGTTAAGTATTTGTGCTGGCTAATCGCCACACTGTTTGTCCAATATACGACTGCC
AACAATGACTCAAGCACAACGATTCTAAACGAAGATGAACTTTTTCTCAACGAATTTTGG
GGCAACTACTATGGGGAAAAATATCGTCACTTCCCAGAAGTCGACCGACTTAAAAGCAAG
GAGGACGCCAAAAACATGTTTTACTTTGGCTATGACAGCTATATGACACATGCATTTCCT
CAAGATGAACTAAATCCTATTGATTGTTCCGGACGAGGACCTGATGTTTTAAATCCATCA
AATCTAAACATCAACGATGTTCTGGGAAACTTTTCTCTCACACTTGTGGATTCCCTTGAT
TCTTTAGCGGTGCTTGGAAATGCCACAGAGTTTAAAAGAGCTGTGCAAATTGTCATTGAC
AATGTGAATTTCGACCTTAACTCAACTGTGCAAGTTTTTGAGACAAATATCCGGGTTCTC
GGTTCGCTGTTGGCTTCACATTTGATAATTGTTGACCCAAAACAGCCATTTGGTGACATG
AGACCTCGCGGGTATGAAAACGAGCTGCTAGACATGGCACATGATCTCGCTGTAAGGCTG
CTGCCAGCATTTGATTCTGCCAAATATGGAATTCCTTTTCCAAGAGTCAACTTGCGACAT
GGGGTTCCGAACAACACGCTGACGCACACAGCCACAGCTGGTGCTGGTTCTTTGTTGTTG
GAATTCGGCACACTCAGTCGGTTGCTAGGCGACCCAACATTCGAAAACGCAGCTCGACGG
GCTGTTGATGAGATATGGGACCGAAGAAATGAGAAGACCGGTCTTTTGGGAATTGCAATC
GATGTAAACACTGGCAAGTGGATGGGAAGGCAGAGTGGTCTCGGCGCTGGTGTCGACTCG
TTTTTTGAATATCTACTGAAGTCATACATCCTGTTCGGCGAAGAGCGAGATTTGGAAATG
TTTAACGAAGCACTTCAAAACATTAAAGATCATTTGAGACGAGGGCGAACACATTGCAAC
AGCGGTATGGGGGATCCCCCTATTTATGTCAATGTGGATTTGTCAAGTGGAAACATCATA
AACACGTGGGTCGATTCACTACAAGCCTTTTTACCCGGCCTACTGGTGCTCAACGGCGAC
ATAGAAGAAGCAATTTGTTGTCATGCTCTCTACTACACCATCTGGAAGAAATTCGATGCC
CTGCCCGAAAGATTCAACTGGCATTTAAAGCTTCCAGATGTTCAATTCTACCCTTTGCGG
CCGGAACTGATTGAAAGCACCTATCTGCTATACAGGGCCACGAAAAATCCATTCTACTTG
CACGTGGGACGCGAGATCTTGGATTCAATTGAGCTTCATGCACGAACAGAGTGTGGTTAC
GCATCACTCCACAATGTGGTCGACAAATCGCAGGAGGATCGGATGGAATCTTTTTTCCTC
AGCGAGACTTGCAAATACTTGTACCTGGTAAGT

InterProScan

Gene3D
6hp_glycosidase-like_sf (IPR012341) - T[50-491] 6.7E-146
SUPERFAMILY
Seven-hairpin_glycosidases (IPR036026) - T[56-490] 3.01E-134
Pfam
Glyco_hydro_47 (IPR001382) - T[66-490] 2.7E-111
PRINTS
Glyco_hydro_47 (IPR001382) - T[66-86] 1.2E-53 - T[112-126] 1.2E-53 - T[149-167] 1.2E-53 - T[203-222] 1.2E-53 - T[295-312] 1.2E-53 - T[363-379] 1.2E-53 - T[418-442] 1.2E-53 - T[477-491] 1.2E-53

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
EDEM3_HUMAN 44.342 % 349 5.7E-111
EDEM2_HUMAN 42.955 % 336 2.17E-109
EDEM1_HUMAN 68.636 % 647 0