- Clone 'M1G7' >
- Clone 'ma316d16' >
- Transcript 'Phfumi.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S2066.g04470.01.t
Possible name(s)
EDEM1; EDEM2; EDEM3
Gene model
Location
S2066 [6,123 / 12,128]
Amino acid sequence
Length: 491
>Phfumi.CG.MTP2014.S2066.g04470.01.p
MFVKYLCWLIATLFVQYTTANNDSSTTILNEDELFLNEFWGNYYGEKYRHFPEVDRLKSK
EDAKNMFYFGYDSYMTHAFPQDELNPIDCSGRGPDVLNPSNLNINDVLGNFSLTLVDSLD
SLAVLGNATEFKRAVQIVIDNVNFDLNSTVQVFETNIRVLGSLLASHLIIVDPKQPFGDM
RPRGYENELLDMAHDLAVRLLPAFDSAKYGIPFPRVNLRHGVPNNTLTHTATAGAGSLLL
EFGTLSRLLGDPTFENAARRAVDEIWDRRNEKTGLLGIAIDVNTGKWMGRQSGLGAGVDS
FFEYLLKSYILFGEERDLEMFNEALQNIKDHLRRGRTHCNSGMGDPPIYVNVDLSSGNII
NTWVDSLQAFLPGLLVLNGDIEEAICCHALYYTIWKKFDALPERFNWHLKLPDVQFYPLR
PELIESTYLLYRATKNPFYLHVGREILDSIELHARTECGYASLHNVVDKSQEDRMESFFL
SETCKYLYLVS
Nucleotide sequence
Length: 1,473
>Phfumi.CG.MTP2014.S2066.g04470.01.t
ATGTTTGTTAAGTATTTGTGCTGGCTAATCGCCACACTGTTTGTCCAATATACGACTGCC
AACAATGACTCAAGCACAACGATTCTAAACGAAGATGAACTTTTTCTCAACGAATTTTGG
GGCAACTACTATGGGGAAAAATATCGTCACTTCCCAGAAGTCGACCGACTTAAAAGCAAG
GAGGACGCCAAAAACATGTTTTACTTTGGCTATGACAGCTATATGACACATGCATTTCCT
CAAGATGAACTAAATCCTATTGATTGTTCCGGACGAGGACCTGATGTTTTAAATCCATCA
AATCTAAACATCAACGATGTTCTGGGAAACTTTTCTCTCACACTTGTGGATTCCCTTGAT
TCTTTAGCGGTGCTTGGAAATGCCACAGAGTTTAAAAGAGCTGTGCAAATTGTCATTGAC
AATGTGAATTTCGACCTTAACTCAACTGTGCAAGTTTTTGAGACAAATATCCGGGTTCTC
GGTTCGCTGTTGGCTTCACATTTGATAATTGTTGACCCAAAACAGCCATTTGGTGACATG
AGACCTCGCGGGTATGAAAACGAGCTGCTAGACATGGCACATGATCTCGCTGTAAGGCTG
CTGCCAGCATTTGATTCTGCCAAATATGGAATTCCTTTTCCAAGAGTCAACTTGCGACAT
GGGGTTCCGAACAACACGCTGACGCACACAGCCACAGCTGGTGCTGGTTCTTTGTTGTTG
GAATTCGGCACACTCAGTCGGTTGCTAGGCGACCCAACATTCGAAAACGCAGCTCGACGG
GCTGTTGATGAGATATGGGACCGAAGAAATGAGAAGACCGGTCTTTTGGGAATTGCAATC
GATGTAAACACTGGCAAGTGGATGGGAAGGCAGAGTGGTCTCGGCGCTGGTGTCGACTCG
TTTTTTGAATATCTACTGAAGTCATACATCCTGTTCGGCGAAGAGCGAGATTTGGAAATG
TTTAACGAAGCACTTCAAAACATTAAAGATCATTTGAGACGAGGGCGAACACATTGCAAC
AGCGGTATGGGGGATCCCCCTATTTATGTCAATGTGGATTTGTCAAGTGGAAACATCATA
AACACGTGGGTCGATTCACTACAAGCCTTTTTACCCGGCCTACTGGTGCTCAACGGCGAC
ATAGAAGAAGCAATTTGTTGTCATGCTCTCTACTACACCATCTGGAAGAAATTCGATGCC
CTGCCCGAAAGATTCAACTGGCATTTAAAGCTTCCAGATGTTCAATTCTACCCTTTGCGG
CCGGAACTGATTGAAAGCACCTATCTGCTATACAGGGCCACGAAAAATCCATTCTACTTG
CACGTGGGACGCGAGATCTTGGATTCAATTGAGCTTCATGCACGAACAGAGTGTGGTTAC
GCATCACTCCACAATGTGGTCGACAAATCGCAGGAGGATCGGATGGAATCTTTTTTCCTC
AGCGAGACTTGCAAATACTTGTACCTGGTAAGT
| Gene3D |
6hp_glycosidase-like_sf (IPR012341) - T[50-491] 6.7E-146 |
| SUPERFAMILY |
Seven-hairpin_glycosidases (IPR036026) - T[56-490] 3.01E-134 |
| Pfam |
Glyco_hydro_47 (IPR001382) - T[66-490] 2.7E-111 |
| PRINTS |
Glyco_hydro_47 (IPR001382) - T[66-86] 1.2E-53 - T[112-126] 1.2E-53 - T[149-167] 1.2E-53 - T[203-222] 1.2E-53 - T[295-312] 1.2E-53 - T[363-379] 1.2E-53 - T[418-442] 1.2E-53 - T[477-491] 1.2E-53 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EDEM3_HUMAN | 44.342 % | 349 | 5.7E-111 |
| EDEM2_HUMAN | 42.955 % | 336 | 2.17E-109 |
| EDEM1_HUMAN | 68.636 % | 647 | 0 |