- Transcript 'Phfumi.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S2214.g04620.01.t
Possible name(s)
FZD6; SFRP5; SMO
Gene model
Location
S2214 [3,199 / 5,171]
Amino acid sequence
Length: 206
>Phfumi.CG.MTP2014.S2214.g04620.01.p
MTTPSGIINISSTTQGLEKCEKLASLPCESLNSSTSCFGTAIPNTATSFELAGDASTLVE
AKDRLLLWSGLKAVPRCWDVIQPLLCSVYYPTCENNKINLPDRSLCLETRSPCRIVELEH
GWPDFLKCDNNEVFDDGCQINKLRFNQSDCELPLIATTNKASYYDGVEGCGLQCMNPLFN
QTQHDEIHAFIAGWASVACLCTFFAM
Nucleotide sequence
Length: 618
>Phfumi.CG.MTP2014.S2214.g04620.01.t
ATGACCACCCCTTCCGGGATTATAAACATTTCTTCTACCACGCAAGGATTGGAAAAATGT
GAAAAGCTAGCATCTTTACCATGTGAAAGCCTGAACAGTTCCACATCTTGCTTTGGAACT
GCAATTCCCAATACTGCAACTTCATTCGAGCTTGCTGGGGATGCCAGTACTTTGGTTGAG
GCCAAAGACAGGTTATTGCTTTGGTCAGGTTTGAAAGCTGTCCCGCGATGTTGGGATGTA
ATTCAACCTCTATTATGCTCAGTCTACTATCCAACATGTGAGAACAACAAGATTAATCTT
CCAGACAGATCTTTATGCTTGGAAACTCGCAGTCCTTGTCGGATAGTGGAACTTGAACAT
GGATGGCCAGACTTTCTTAAATGTGACAACAATGAAGTTTTTGATGATGGTTGCCAGATC
AACAAACTGAGGTTTAACCAGTCTGACTGTGAACTGCCACTGATTGCTACCACCAACAAA
GCCTCATACTATGATGGTGTTGAAGGCTGTGGCTTGCAATGCATGAATCCTCTCTTTAAC
CAGACACAACATGATGAAATTCATGCCTTTATCGCAGGCTGGGCATCTGTTGCATGTCTG
TGTACTTTTTTTGCCATG
| Gene3D |
Frizzled_dom_sf (IPR036790) - T[7-138] 4.4E-37 |
| PANTHER |
SMO (IPR026544) - T[14-206] 7.9E-74 |
| PANTHER |
Frizzled/SFRP (IPR015526) - T[14-206] 7.9E-74 |
| SMART |
Frizzled_dom (IPR020067) - T[27-144] 4.2E-16 |
| SUPERFAMILY |
Frizzled_dom_sf (IPR036790) - T[28-139] 1.31E-19 |
| ProSiteProfiles |
Frizzled_dom (IPR020067) - T[28-153] 14.314 |
| Pfam |
Frizzled_dom (IPR020067) - T[28-130] 1.7E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SMO_HUMAN | 49.741 % | 204 | 1.57E-61 |