Aniseed - Transcript Card

Region 'REG00001587' >
Transcript 'Phfumi.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S2369.g04778.02.t

Possible name(s)

AVPR1A; AVPR2; GNRHR

Gene model

Phfumi.CG.MTP2014.S2369.g04778

Location

S2369 [946 / 6,511]

Sequences

Amino acid sequence

Length: 245

>Phfumi.CG.MTP2014.S2369.g04778.02.p
MDFTASPTTDIFNFTANASDLLNSTVCQERFEQVFVDGVIDCNLTYSKFMKDHRLIFDTG
QLIRVVGTFMIFLLSCAGNFTVLACVTVWRRSNHMTHTQLIIFHLCLANLCFTFFILPMD
AVWNYTMEWYGGDAMCRIMNMLKQFGMYISSAVIVVMGVDKVLGLLSPCSPNQQTKRIKL
CLLVAWTFSAANAIPASIIFSVKQSHRIFKCDCEDFYIVQCVDMHVVSKVGLTVFFSYTM
AISXY

Nucleotide sequence

Length: 735

>Phfumi.CG.MTP2014.S2369.g04778.02.t
ATGGACTTTACCGCGAGTCCGACGACCGACATCTTCAATTTTACGGCAAATGCGAGCGAC
CTGTTGAATTCAACCGTCTGTCAGGAACGATTTGAGCAGGTCTTCGTTGACGGAGTAATC
GACTGCAATCTCACGTACTCGAAATTCATGAAAGACCACCGGCTTATCTTCGACACCGGG
CAATTAATCCGGGTCGTTGGGACCTTCATGATCTTCCTTCTCTCGTGCGCCGGCAACTTC
ACTGTGCTTGCATGCGTGACGGTGTGGCGACGGAGCAACCATATGACTCACACCCAGCTG
ATTATTTTCCATCTCTGCCTCGCCAATCTCTGTTTCACCTTCTTCATTTTGCCGATGGAC
GCTGTATGGAATTACACAATGGAATGGTACGGCGGGGACGCTATGTGCCGCATCATGAAC
ATGCTCAAACAGTTCGGCATGTACATCTCGTCAGCAGTCATCGTGGTAATGGGAGTGGAT
AAAGTGCTTGGGTTACTGAGCCCGTGTTCGCCCAATCAGCAAACGAAACGCATCAAGTTA
TGTTTGCTTGTGGCTTGGACCTTCAGCGCCGCAAATGCCATTCCAGCGAGCATCATTTTC
TCGGTCAAGCAAAGTCATCGAATATTTAAATGCGACTGCGAGGATTTCTACATCGTCCAG
TGTGTAGATATGCACGTGGTAAGCAAGGTTGGGCTTACCGTGTTCTTCTCTTACACCATG
GCGATCTCANACTAT

InterProScan

PRINTS	GphnRH_fam_rcpt (IPR001658) - T[60-78] 1.0E-5 - T[118-133] 1.0E-5
PRINTS	GPCR_Rhodpsn (IPR000276) - T[63-87] 5.1E-6 - T[98-119] 5.1E-6 - T[143-165] 5.1E-6 - T[177-198] 5.1E-6
ProSiteProfiles	GPCR_Rhodpsn_7TM (IPR017452) - T[78-245] 16.881
Pfam	GPCR_Rhodpsn (IPR000276) - T[82-219] 3.9E-14

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
GNRHR_HUMAN	32.639 %	93.6	2.09E-22