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TRANSCRIPT CARD

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  1. Clone 'ma162e15' > 
  2. Clone 'cilv017p20' > 
  3. Transcript 'KH2012:KH.S534.1.v1....' > 
  4. Transcript 'KH2012:KH.C2.703.v1....' > 
  5. Transcript 'Phfumi.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S2376.g04784.01.t

Possible name(s)

LIN28A; LIN28B; YBX2

Gene model

Phfumi.CG.MTP2014.S2376.g04784

Location

S2376 [806 / 1,188]

Sequences

Amino acid sequence

Length: 103

>Phfumi.CG.MTP2014.S2376.g04784.01.p
MNGFRSLHDSEDVKVQYKKSSLGWEATVVCGPNGEDCIGNVRRPKRRKRPDSFRCYNCGE
AGHHAKECNLPPLPKRCHHCKSIEHLVVDCPNKQESPPDTNET

Nucleotide sequence

Length: 309

>Phfumi.CG.MTP2014.S2376.g04784.01.t
ATGAACGGATTTCGAAGTCTGCATGATAGTGAAGACGTTAAAGTCCAGTACAAAAAATCC
TCTCTTGGTTGGGAAGCAACTGTTGTTTGTGGACCCAATGGAGAAGATTGCATAGGAAAT
GTACGCCGGCCAAAGCGCCGAAAGAGACCGGACAGTTTCAGGTGCTACAATTGCGGGGAA
GCAGGACATCATGCAAAGGAGTGTAATCTTCCCCCATTGCCTAAACGTTGCCATCACTGC
AAATCCATCGAACATTTGGTAGTTGATTGTCCGAATAAACAGGAATCTCCGCCAGACACT
AATGAAACA

InterProScan

SUPERFAMILY
Znf_CCHC_sf (IPR036875) - T[44-94] 3.44E-12
ProSiteProfiles
Znf_CCHC (IPR001878) - T[54-68] 10.675
SMART
Znf_CCHC (IPR001878) - T[54-70] 0.01 - T[76-92] 0.045
Pfam
Znf_CCHC (IPR001878) - T[54-68] 9.8E-6 - T[76-92] 0.0036

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
LN28B_HUMAN 50.476 % 113 2.03E-32
LN28A_HUMAN 50.476 % 109 1.43E-31