- Clone 'ciem839l16' >
- Transcript 'KH2012:KH.S793.1.v1....' >
- Clone 'cien185404' >
- Transcript 'KH2012:KH.L55.3.v1.A...' >
- Transcript 'Phfumi.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S23.g00399.03.t
Possible name(s)
AL121581.1; MYT1
Gene model
Location
S23 [11,502 / 16,566]
Amino acid sequence
Length: 1,137
>Phfumi.CG.MTP2014.S23.g00399.03.p
SMDTAVAQAVGTLPTSGDAADKANNFRYTLSVGSLQDNSRFSEDKSPVSGQSPQPIEKSN
GFDNRSDALTPSSDESVRSCSPEAEADCERNMEQFPAALRMQNSNLFVAMFANLIGNRMA
FPARATMQQDESNEVPQHGSSPLSPPSRNQNADMCEEARDENEDVTCGKPVRTENENNIA
AGVSKCSGDESTDQTGLCGNTSATSASDKDRSPMGAGRMYSSPINLDVLNQPRTPSCDQR
MDNLQCYRPTPQHIAPKDIISPPSTDQKSGNQGDLGFNSGNNYSKDSKCPTPGCRGEGHI
TGLYSHHRSFSGCPLKDQMPKDAIQALNEGSVKCPTPGCIGKGHVNGNRQTHRSVSGCPI
AAQNKRMQQQMRAETKQPNGRKPGFPQFGKQGQLVYPFMDRGKFPAAALNLPPPFGKNEI
SHESQPVKDSLSPNRRETAVTAGNVVLNATQGFSRINAGFKPPLIPPYYCATPPNQQSLA
QAKIFASAMEAMRIQQQMMSRFHQPMLMDSNRAALNEGPWRNSERVESRESDVAESPKRK
RSFSPSSTPPPKTSEVAHSIESIMRRSPNVASGRPTTPNRGVDQDVAHNPVKRAKTSGSP
DQESQKLYTNRLTAEVLNRFQQSAGLLPYYPALFNPRRMMQMPTPLVGMPEKERSPVQEP
DERSKIYDEQKEKDDERRDSGYGDSPGHDSELLKPGSRECPEPAPKSVERVQNDDSAGDK
PSAAENCVLDLSVKSSSRTSTPPVITRSPVTINAPSTPKRQKRKSLASIQIDDAIPNRER
NLKSLLECGFQPINPNFSKHSTPKSEPAGEKHHPSMFGLDRFRQVPFSQAQFYSQAQRSY
GPTMCEEKSNIHVKNLQKVHLSPHHPPSFQPIPYTGTMSPNHSALDRSSKFSPAALRELV
KTGANPNVSFPLAPVRQKIPGKKKELLTCPMPGCDGSGHSTGNYTSHRSLSGCPLAPRGL
VTACASEMKCPTEGCDGSGHVTGNYTSHRSSSGCPLARKNRASQHGMTKTLGAANNLTVN
DQIPDTFDINRSTSTSQSLAGVLSQQTMEDKQDNKPHFLCHSEQKVFATKSSPRSDSYDM
PTMIHKPVPFNVARESYFALTNFDDSRNERIMSDSNDDRVGVYGEHGEQSSDCPKSL
Nucleotide sequence
Length: 3,411
>Phfumi.CG.MTP2014.S23.g00399.03.t
AGTATGGATACCGCTGTGGCGCAAGCCGTAGGTACTCTGCCCACTTCGGGCGATGCTGCG
GACAAAGCGAATAACTTCAGGTATACCCTTTCCGTGGGTAGCCTTCAAGACAACTCGAGG
TTCTCCGAAGATAAATCTCCCGTGAGCGGGCAATCACCTCAACCAATAGAAAAATCGAAC
GGGTTCGACAATCGCAGCGACGCTCTTACGCCGTCTAGCGACGAGAGCGTGAGAAGCTGC
AGCCCCGAAGCTGAAGCGGATTGCGAACGAAACATGGAACAGTTCCCGGCGGCACTGCGA
ATGCAAAATTCAAATCTCTTTGTCGCCATGTTTGCCAATCTAATTGGAAACAGGATGGCT
TTTCCTGCACGCGCTACTATGCAGCAAGACGAGTCAAACGAGGTGCCACAACATGGTAGT
TCGCCACTGTCACCTCCTAGCAGGAATCAGAACGCGGACATGTGTGAAGAGGCGCGCGAT
GAGAATGAAGATGTTACCTGCGGCAAACCTGTTCGGACCGAAAACGAAAACAATATTGCA
GCTGGTGTTTCAAAGTGCAGCGGTGACGAATCGACGGATCAAACCGGTTTATGTGGTAAT
ACTAGCGCAACGAGTGCGTCTGACAAGGACAGGTCACCAATGGGGGCTGGTCGCATGTAC
TCATCGCCAATAAACCTAGACGTGTTGAACCAACCGAGGACCCCGTCTTGCGATCAACGC
ATGGACAACCTGCAGTGTTATCGCCCCACTCCCCAACATATCGCCCCGAAAGATATTATC
TCACCACCATCGACTGATCAAAAAAGTGGCAACCAAGGCGACCTGGGTTTTAATTCCGGC
AACAACTACAGCAAAGACAGCAAGTGCCCGACCCCGGGCTGTCGAGGAGAGGGTCACATC
ACGGGATTATATTCTCATCATCGCAGCTTTAGTGGCTGTCCGTTGAAGGACCAAATGCCC
AAAGATGCAATTCAAGCCCTGAACGAAGGATCTGTCAAGTGCCCAACTCCTGGCTGCATT
GGCAAGGGTCACGTGAATGGCAATCGGCAAACCCACCGCAGTGTGTCTGGATGCCCGATT
GCAGCTCAAAACAAGCGAATGCAACAACAGATGCGAGCTGAAACGAAACAGCCGAACGGA
AGAAAGCCCGGCTTTCCACAATTTGGAAAGCAAGGGCAGTTGGTTTATCCGTTTATGGAC
CGGGGAAAGTTTCCCGCGGCAGCTTTGAATTTACCACCACCTTTCGGAAAAAATGAAATT
AGCCACGAATCTCAACCAGTGAAGGATAGTCTCAGTCCGAATCGAAGGGAAACCGCAGTT
ACCGCAGGCAACGTGGTTTTAAATGCTACGCAAGGCTTTAGCCGAATTAACGCCGGATTT
AAACCTCCTTTGATACCACCATATTACTGCGCGACACCGCCAAACCAACAATCACTCGCA
CAGGCTAAGATATTTGCTTCTGCAATGGAAGCCATGCGAATTCAACAGCAGATGATGTCA
CGGTTTCATCAACCGATGCTGATGGATAGCAACCGCGCGGCTTTAAATGAAGGACCGTGG
AGAAATAGCGAGAGGGTAGAGTCCCGCGAAAGCGATGTAGCCGAGTCGCCGAAGCGAAAG
CGATCGTTCTCCCCGTCATCAACTCCACCCCCGAAGACGTCAGAAGTGGCTCACAGCATC
GAGTCGATAATGAGGCGATCACCCAACGTGGCCAGCGGCCGACCGACCACACCGAACCGA
GGTGTCGATCAGGACGTTGCGCACAACCCAGTAAAACGTGCTAAAACTTCAGGTTCTCCT
GACCAAGAATCCCAAAAGCTTTACACTAACCGCCTGACTGCTGAGGTTCTCAATCGATTT
CAACAGTCTGCTGGGTTATTGCCCTACTACCCGGCACTCTTCAACCCTCGCAGGATGATG
CAGATGCCAACGCCTTTGGTCGGTATGCCAGAAAAAGAGCGATCGCCGGTGCAAGAGCCC
GATGAGAGATCTAAAATATACGATGAGCAAAAGGAAAAGGACGACGAGAGAAGAGATTCC
GGGTATGGCGACAGTCCTGGGCACGACAGTGAGTTGCTAAAGCCTGGGAGCCGAGAATGT
CCGGAGCCGGCGCCCAAGTCGGTTGAGCGGGTTCAAAACGACGATTCTGCCGGCGATAAA
CCATCTGCTGCGGAAAATTGCGTTTTGGACCTCAGTGTGAAGTCTTCATCGCGTACCTCT
ACTCCGCCAGTGATCACAAGATCACCAGTTACCATCAACGCGCCTTCAACACCGAAAAGA
CAAAAACGGAAGTCTTTAGCTAGCATACAAATCGATGACGCTATTCCGAACCGGGAGCGC
AATCTTAAATCCCTTTTGGAATGTGGATTTCAACCGATTAATCCAAACTTTTCCAAACAC
TCCACACCCAAATCAGAGCCTGCTGGAGAAAAACACCATCCAAGCATGTTTGGACTTGAT
CGTTTCAGACAAGTGCCCTTTTCACAAGCTCAGTTTTACTCTCAGGCCCAGAGATCGTAC
GGACCCACCATGTGCGAGGAAAAGTCAAACATCCATGTAAAAAATTTGCAGAAAGTGCAT
CTGAGTCCACATCATCCGCCTTCATTCCAACCCATCCCTTACACAGGGACAATGTCCCCT
AACCATTCGGCTCTGGATCGAAGTAGCAAATTTTCTCCTGCAGCACTACGCGAACTCGTG
AAGACTGGAGCCAACCCAAACGTGTCGTTTCCGCTGGCGCCTGTGCGTCAGAAGATTCCC
GGGAAAAAGAAAGAGCTACTCACGTGTCCGATGCCCGGATGCGATGGAAGTGGACATTCT
ACAGGCAATTACACGTCACACAGAAGCTTGTCGGGTTGCCCACTTGCACCCAGAGGCCTT
GTCACTGCCTGCGCTTCAGAGATGAAGTGTCCGACAGAGGGATGTGATGGTTCAGGACAC
GTCACAGGAAACTACACGTCACACAGAAGCTCGTCAGGTTGTCCCCTAGCCAGAAAGAAC
CGCGCTTCCCAGCATGGAATGACAAAGACCCTCGGCGCAGCAAACAATCTAACTGTCAAC
GACCAAATTCCTGACACGTTTGACATAAACAGATCGACCTCAACATCGCAGTCTCTCGCT
GGCGTGTTGTCACAACAGACCATGGAAGACAAACAGGACAACAAACCACACTTCCTTTGC
CATAGCGAGCAGAAAGTATTCGCCACGAAGTCATCTCCCCGCAGTGACAGTTACGATATG
CCAACCATGATTCACAAGCCGGTGCCCTTCAATGTGGCACGTGAGTCGTATTTTGCTTTG
ACGAACTTTGACGACAGTCGCAACGAACGGATCATGTCGGATTCAAATGATGACCGTGTT
GGTGTTTATGGTGAACATGGCGAACAGTCGTCTGACTGCCCAAAATCCTTG
| ProSiteProfiles |
Znf_C2HC (IPR002515) - T[280-323] 16.644 - T[325-368] 16.42 - T[920-963] 18.191 - T[966-1004] 10.839 |
| SUPERFAMILY |
Znf_C2HC_sf (IPR036060) - T[286-326] 5.36E-14 - T[332-372] 2.35E-13 - T[927-964] 3.79E-13 - T[967-1005] 2.48E-14 |
| Pfam |
Znf_C2HC (IPR002515) - T[288-315] 3.7E-11 - T[333-361] 2.1E-13 - T[928-956] 1.2E-13 - T[969-997] 1.4E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MYT1L_HUMAN | 47.794 % | 128 | 5.52E-30 |
| MYT1_HUMAN | 72.84 % | 129 | 3.38E-30 |
| ST18_HUMAN | 73.75 % | 128 | 5.16E-30 |