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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S70....' > 
  2. Clone 'AHC0AAA198YL11' > 
  3. Transcript 'Boleac.CG.SB_v3.S85....' > 
  4. Transcript 'Boleac.CG.SB_v3.S879...' > 
  5. Transcript 'Phfumi.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S23.g00403.02.t

Possible name(s)

GREB1; GREB1L

Gene model

Phfumi.CG.MTP2014.S23.g00403

Location

S23 [48,506 / 56,696]

Sequences

Amino acid sequence

Length: 784

>Phfumi.CG.MTP2014.S23.g00403.02.p
MASPQLGQKSNLPSAPPTSRLPGTQNLDSPLQNAIHRLHGQPHPLLGRSMSGPSQRNIPD
TLKRLSSNIGDDETQDQLQPKRYMINRDTSAFSTVDISPDLAFNIQRKPVVVFLCPTNNL
PRFSGDISNITVTQTYSECFKEPLTSIKEQLDFADHSPLSNDVMLLITMQYVVSLGAERE
LSKEGLSDTIVQARRSLPDTFLATVKELKPTSVISLANFFASTSQDRVRMIVSELSSADA
ITQCLRNLASPTRPLYQMAVHVTSMTGTCNLQFHLVVSSKRKCRTMSEHLLSTEDQSALL
KQSLVSLPFTQLRLSLSGPFAVCNNVPHQPSPPAFQLFVPRRHESPNHTSITAQCPTFLQ
HEAHLVSLLTSKILECQGSLNFSVFTSLRFIFLLPPCPALHNQTVSTITHSGVLSDIYKT
FLPGSALSSQVVMTMEPSSKQRLLSVCKQWEDTSTLLVIIQLEANLTSNNSDESDFLNNT
SVTNSKNVLVVQCTSSPYLLLTNRSRIAHGHAVRALPTVGLHSNDNTSGESDTLPLATVF
DSQYEAIKWSLLDNNFMLHTSLVACELMLQQYAGAITQEAYGVDESWRVDPQRARLLSPV
ITRVVQDLMRSSRDGDGAMVIVRIPSSILATRFHDSITETRDKLGLERVFEVVLYSSCDK
EVALSRHFLRMLKNWNPETRDWMPTSLEDLVGIPCIVVYEGEGLVNQRIPRNIQHVDLRM
VFEGSGDLNRSLIERELSICHPVCYQPANASQRTQSPPKKRQKHSSDDEGALQVVEQEGN
TITA

Nucleotide sequence

Length: 3,675

>Phfumi.CG.MTP2014.S23.g00403.02.t
ATGCGTTCCAAAAACATCCTACCCGTACAGGTGGTGTCTTCTTCTGACCTAATGGGTAGT
AACCAGTCTGCCCATAAGGCTGCATTTGAGGAGGCTTTACACAGTAGCATTGAATCATCT
TTACGATCAGCAGCAGTTGTTCCCAGCTCAGTTTTCTCCACATTATTCTTCTCCCTTCGA
CAATCGAGTTCCGCAATACCTGACGATCAACAAGATGTGAAACCGAATGTCAATCAATTG
AGTGAGGAGGTGAGCAAGCATGCAGGCAGTGAACAAACAGAAGATAAGGCAGCTTCTACC
GCCCTTGTTCCAAGCATATCACAACAGTTAACAGCAGCTATTTCCAGTCAGCAATCACCA
TCATCTGCTAAAGATGTTGGATCTGTGTTTCCAACAGCCCAAATTCGACCACAAGGATTG
CTCGCTGATCATCGAACACCTGATGGAAGACAAATTGGGCCACGGCCGACTATGCCACTT
ATTACCCAGCAGCAACACATGGAGCTGCAAAGATTTAAGCAGCTCCAGCGGTTACGGGTA
TGGCAACAAATGCAAAGTGAGCAGCAGTCCAAATCTCAACCGATGGTCAGGAATCCTTCT
GCCTCTGATGTTTTATATTCAGGACCAAATCAACTTGCCCTGTCAAGTCGTACCCAGCCT
ATGAGTCTGGAAATGAGGAAACCCCCACCACCAATGCCAGCGCTGACATCTCCAATCAAT
GGCATGCATGGCAATGGAACATCCAACACTCGAATGACTTTTGAAGGTAGAGCTGAAAGG
CAAGGAAGCCGAATTGCAGGTTTCTGCAAAACTGGAAAAGATATTCGGCTGTCCACGTTT
GAGAACGACGTCATGTCCATGGCTGGCTTTCCCTTTACATATGCATTGTTATGTATGCAA
TTAAACCCAAGATCAGGGGATGCATCGACGCTGGTGATCATTGCGCTGAATCTCAAGTCT
TTGCCTCCGCCGAACACTTCTGCCCAAGCACTGTCAGCGCAGTGTGTCGGGTGCGGGGAA
AAGGCACTGCACACCTTCAGCCAGCTGTCAGAACACATCGGCCTGGAAGCGACCGTGGAT
TTGACAAGCCCAAGACTGTCCACCAATTCCAGCCAGCTCATTGGTGCTCACGCACAATTT
TACCTCGTCAAGGATCCCAAAGTCCCAAGCCGTTTGATAAGAGGCCCTCCGATCTTGTGG
AACAAAGGCACAGAAGGTAGAATTTGTGCATAACGCGATAATACGAGTTTTTCTCATGTG
TATACGTTTACAGGACAACTGCAGTCCGGGTTGCCCTCCCCAAGAGCAGGAATATTGCCT
GTCATGGCTTCGCCTCAGTTGGGTCAAAAATCGAATCTACCGTCTGCACCTCCGACCTCT
CGCTTGCCAGGCACCCAGAATCTTGACTCGCCCCTGCAGAACGCCATCCATCGCCTGCAC
GGGCAGCCCCACCCGTTGCTGGGCAGGTCGATGTCTGGCCCGTCCCAACGCAACATTCCT
GATACACTCAAGCGACTTAGCTCCAACATAGGTGATGACGAGACGCAAGATCAACTTCAG
CCCAAACGGTACATGATAAATCGTGACACCTCAGCTTTTTCCACCGTCGATATATCTCCT
GACTTGGCCTTCAACATACAGCGAAAGCCGGTCGTTGTTTTTCTGTGTCCCACCAACAAT
CTACCTCGCTTTTCCGGCGACATCTCCAATATTACTGTGACGCAAACTTATTCTGAATGC
TTTAAGGAACCCCTGACTAGCATTAAGGAGCAATTAGATTTCGCCGATCATTCCCCGTTG
TCCAACGATGTCATGTTACTAATTACAATGCAATATGTTGTTTCACTTGGTGCGGAACGG
GAATTGAGCAAGGAAGGTCTGTCGGATACAATCGTGCAAGCTCGACGAAGTCTCCCCGAC
ACGTTCCTCGCCACCGTGAAAGAACTGAAGCCGACAAGTGTGATCAGTCTTGCCAATTTT
TTCGCCTCCACATCACAAGACCGTGTTAGGATGATCGTCAGCGAGTTGTCCAGCGCTGAT
GCAATTACACAATGTTTGCGCAACCTCGCCAGCCCGACGCGACCCCTGTACCAAATGGCT
GTGCACGTCACCTCGATGACCGGCACCTGCAATCTCCAGTTTCATCTCGTCGTTTCCAGT
AAACGAAAGTGCCGGACGATGAGCGAACATTTGCTTTCCACTGAAGATCAGTCGGCGCTT
TTGAAGCAGAGCTTGGTGTCGTTGCCTTTTACACAGCTTCGCTTGTCTTTGTCCGGCCCT
TTCGCCGTGTGTAACAATGTACCTCATCAACCATCGCCGCCTGCCTTTCAACTGTTCGTT
CCGCGACGACATGAATCTCCCAATCATACCTCAATCACTGCACAGTGTCCGACGTTTCTC
CAACACGAAGCTCACCTCGTGTCTTTGCTCACCTCGAAAATCTTGGAATGCCAAGGCAGC
CTCAACTTCTCAGTCTTCACCTCGTTGCGATTTATTTTTCTTCTACCTCCCTGTCCCGCT
TTGCACAATCAAACAGTGTCCACCATTACACACTCGGGTGTTTTGTCGGATATCTACAAA
ACCTTCCTACCGGGATCGGCCTTGTCGTCACAGGTTGTCATGACGATGGAGCCTTCTAGC
AAACAAAGGTTGCTGTCTGTTTGCAAGCAATGGGAAGATACCTCAACACTTCTGGTTATC
ATACAGCTGGAAGCAAACCTTACCTCAAATAATTCAGACGAAAGCGATTTCCTCAACAAC
ACCTCTGTTACGAACTCGAAAAATGTGCTAGTTGTGCAATGTACCTCATCACCCTACTTA
CTCCTCACAAACCGTTCCCGAATTGCCCATGGCCATGCGGTTCGCGCGCTGCCAACGGTC
GGTCTCCATAGCAATGACAACACCAGCGGCGAATCAGACACCCTTCCATTAGCAACTGTG
TTTGATTCACAGTACGAGGCGATCAAATGGAGCCTTTTGGACAACAATTTTATGCTCCAC
ACATCTTTGGTGGCATGCGAGTTGATGTTACAACAATACGCCGGAGCGATCACGCAAGAG
GCTTACGGCGTTGATGAAAGCTGGAGAGTTGACCCTCAACGTGCCCGTCTCCTTTCGCCA
GTCATTACAAGAGTTGTTCAGGATCTCATGCGTTCATCTCGTGACGGCGATGGTGCCATG
GTGATCGTCCGAATCCCGTCATCGATCCTGGCCACCCGCTTTCACGACTCAATTACCGAA
ACTAGAGACAAACTGGGTCTTGAGCGTGTCTTCGAGGTGGTGCTATATTCCAGTTGCGAC
AAAGAAGTTGCCCTGTCACGACATTTTCTAAGGATGCTAAAGAATTGGAATCCGGAAACA
AGAGATTGGATGCCAACTTCACTCGAGGATCTGGTCGGTATTCCGTGTATTGTAGTGTAT
GAAGGTGAAGGCCTAGTCAACCAACGTATACCAAGGAACATTCAGCACGTCGATCTCCGT
ATGGTGTTCGAGGGCTCTGGCGATTTGAATCGCAGCTTGATCGAGCGGGAACTGTCAATC
TGCCATCCGGTCTGCTATCAACCCGCCAACGCAAGCCAGCGCACGCAGTCGCCACCCAAA
AAGCGCCAGAAACATTCGTCGGACGACGAGGGAGCCCTACAAGTGGTGGAACAAGAAGGT
AATACTATTACAGCC

InterProScan

PANTHER
GREB1 (IPR028422) - T[63-305] 7.6E-80 - T[377-769] 7.6E-80
Pfam
GREB1 (IPR028422) - T[75-306] 2.5E-18 - T[378-755] 4.5E-45

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
GREB1_HUMAN 25.57 % 122 2.28E-28
GRB1L_HUMAN 26.854 % 177 9.63E-46