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TRANSCRIPT CARD

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  1. Transcript 'NCBI:KH.XM_018816773...' > 
  2. Transcript 'Haaura.CG.MTP2014.S2...' > 
  3. Clone 'cima881326' > 
  4. Transcript 'Phfumi.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S23.g00403.03.t

Possible name(s)

GREB1; GREB1L

Gene model

Phfumi.CG.MTP2014.S23.g00403

Location

S23 [49,228 / 56,696]

Sequences

Amino acid sequence

Length: 1,078

>Phfumi.CG.MTP2014.S23.g00403.03.p
VFPTAQIRPQGLLADHRTPDGRQIGPRPTMPLITQQQHMELQRFKQLQRLRVWQQMQSEQ
QSKSQPMVRNPSASDVLYSGPNQLALSSRTQPMSLEMRKPPPPMPALTSPINGMHGNGTS
NTRMTFEGRAERQGSRIAGFCKTGKDIRLSTFENDVMSMAGFPFTYALLCMQLNPRSGDA
STLVIIALNLKSLPPPNTSAQALSAQCVGCGEKALHTFSQLSEHIGLEATVDLTSPRLST
NSSQLIGAHAQFYLVKDPKVPSRLIRGPPILWNKGTEGQLQSGLPSPRAGILPVMASPQL
GQKSNLPSAPPTSRLPGTQNLDSPLQNAIHRLHGQPHPLLGRSMSGPSQRNIPDTLKRLS
SNIGDDETQDQLQPKRYMINRDTSAFSTVDISPDLAFNIQRKPVVVFLCPTNNLPRFSGD
ISNITVTQTYSECFKEPLTSIKEQLDFADHSPLSNDVMLLITMQYVVSLGAERELSKEGL
SDTIVQARRSLPDTFLATVKELKPTSVISLANFFASTSQDRVRMIVSELSSADAITQCLR
NLASPTRPLYQMAVHVTSMTGTCNLQFHLVVSSKRKCRTMSEHLLSTEDQSALLKQSLVS
LPFTQLRLSLSGPFAVCNNVPHQPSPPAFQLFVPRRHESPNHTSITAQCPTFLQHEAHLV
SLLTSKILECQGSLNFSVFTSLRFIFLLPPCPALHNQTVSTITHSGVLSDIYKTFLPGSA
LSSQVVMTMEPSSKQRLLSVCKQWEDTSTLLVIIQLEANLTSNNSDESDFLNNTSVTNSK
NVLVVQCTSSPYLLLTNRSRIAHGHAVRALPTVGLHSNDNTSGESDTLPLATVFDSQYEA
IKWSLLDNNFMLHTSLVACELMLQQYAGAITQEAYGVDESWRVDPQRARLLSPVITRVVQ
DLMRSSRDGDGAMVIVRIPSSILATRFHDSITETRDKLGLERVFEVVLYSSCDKEVALSR
HFLRMLKNWNPETRDWMPTSLEDLVGIPCIVVYEGEGLVNQRIPRNIQHVDLRMVFEGSG
DLNRSLIERELSICHPVCYQPANASQRTQSPPKKRQKHSSDDEGALQVVEQEGNTITA

Nucleotide sequence

Length: 3,234

>Phfumi.CG.MTP2014.S23.g00403.03.t
GTGTTTCCAACAGCCCAAATTCGACCACAAGGATTGCTCGCTGATCATCGAACACCTGAT
GGAAGACAAATTGGGCCACGGCCGACTATGCCACTTATTACCCAGCAGCAACACATGGAG
CTGCAAAGATTTAAGCAGCTCCAGCGGTTACGGGTATGGCAACAAATGCAAAGTGAGCAG
CAGTCCAAATCTCAACCGATGGTCAGGAATCCTTCTGCCTCTGATGTTTTATATTCAGGA
CCAAATCAACTTGCCCTGTCAAGTCGTACCCAGCCTATGAGTCTGGAAATGAGGAAACCC
CCACCACCAATGCCAGCGCTGACATCTCCAATCAATGGCATGCATGGCAATGGAACATCC
AACACTCGAATGACTTTTGAAGGTAGAGCTGAAAGGCAAGGAAGCCGAATTGCAGGTTTC
TGCAAAACTGGAAAAGATATTCGGCTGTCCACGTTTGAGAACGACGTCATGTCCATGGCT
GGCTTTCCCTTTACATATGCATTGTTATGTATGCAATTAAACCCAAGATCAGGGGATGCA
TCGACGCTGGTGATCATTGCGCTGAATCTCAAGTCTTTGCCTCCGCCGAACACTTCTGCC
CAAGCACTGTCAGCGCAGTGTGTCGGGTGCGGGGAAAAGGCACTGCACACCTTCAGCCAG
CTGTCAGAACACATCGGCCTGGAAGCGACCGTGGATTTGACAAGCCCAAGACTGTCCACC
AATTCCAGCCAGCTCATTGGTGCTCACGCACAATTTTACCTCGTCAAGGATCCCAAAGTC
CCAAGCCGTTTGATAAGAGGCCCTCCGATCTTGTGGAACAAAGGCACAGAAGGACAACTG
CAGTCCGGGTTGCCCTCCCCAAGAGCAGGAATATTGCCTGTCATGGCTTCGCCTCAGTTG
GGTCAAAAATCGAATCTACCGTCTGCACCTCCGACCTCTCGCTTGCCAGGCACCCAGAAT
CTTGACTCGCCCCTGCAGAACGCCATCCATCGCCTGCACGGGCAGCCCCACCCGTTGCTG
GGCAGGTCGATGTCTGGCCCGTCCCAACGCAACATTCCTGATACACTCAAGCGACTTAGC
TCCAACATAGGTGATGACGAGACGCAAGATCAACTTCAGCCCAAACGGTACATGATAAAT
CGTGACACCTCAGCTTTTTCCACCGTCGATATATCTCCTGACTTGGCCTTCAACATACAG
CGAAAGCCGGTCGTTGTTTTTCTGTGTCCCACCAACAATCTACCTCGCTTTTCCGGCGAC
ATCTCCAATATTACTGTGACGCAAACTTATTCTGAATGCTTTAAGGAACCCCTGACTAGC
ATTAAGGAGCAATTAGATTTCGCCGATCATTCCCCGTTGTCCAACGATGTCATGTTACTA
ATTACAATGCAATATGTTGTTTCACTTGGTGCGGAACGGGAATTGAGCAAGGAAGGTCTG
TCGGATACAATCGTGCAAGCTCGACGAAGTCTCCCCGACACGTTCCTCGCCACCGTGAAA
GAACTGAAGCCGACAAGTGTGATCAGTCTTGCCAATTTTTTCGCCTCCACATCACAAGAC
CGTGTTAGGATGATCGTCAGCGAGTTGTCCAGCGCTGATGCAATTACACAATGTTTGCGC
AACCTCGCCAGCCCGACGCGACCCCTGTACCAAATGGCTGTGCACGTCACCTCGATGACC
GGCACCTGCAATCTCCAGTTTCATCTCGTCGTTTCCAGTAAACGAAAGTGCCGGACGATG
AGCGAACATTTGCTTTCCACTGAAGATCAGTCGGCGCTTTTGAAGCAGAGCTTGGTGTCG
TTGCCTTTTACACAGCTTCGCTTGTCTTTGTCCGGCCCTTTCGCCGTGTGTAACAATGTA
CCTCATCAACCATCGCCGCCTGCCTTTCAACTGTTCGTTCCGCGACGACATGAATCTCCC
AATCATACCTCAATCACTGCACAGTGTCCGACGTTTCTCCAACACGAAGCTCACCTCGTG
TCTTTGCTCACCTCGAAAATCTTGGAATGCCAAGGCAGCCTCAACTTCTCAGTCTTCACC
TCGTTGCGATTTATTTTTCTTCTACCTCCCTGTCCCGCTTTGCACAATCAAACAGTGTCC
ACCATTACACACTCGGGTGTTTTGTCGGATATCTACAAAACCTTCCTACCGGGATCGGCC
TTGTCGTCACAGGTTGTCATGACGATGGAGCCTTCTAGCAAACAAAGGTTGCTGTCTGTT
TGCAAGCAATGGGAAGATACCTCAACACTTCTGGTTATCATACAGCTGGAAGCAAACCTT
ACCTCAAATAATTCAGACGAAAGCGATTTCCTCAACAACACCTCTGTTACGAACTCGAAA
AATGTGCTAGTTGTGCAATGTACCTCATCACCCTACTTACTCCTCACAAACCGTTCCCGA
ATTGCCCATGGCCATGCGGTTCGCGCGCTGCCAACGGTCGGTCTCCATAGCAATGACAAC
ACCAGCGGCGAATCAGACACCCTTCCATTAGCAACTGTGTTTGATTCACAGTACGAGGCG
ATCAAATGGAGCCTTTTGGACAACAATTTTATGCTCCACACATCTTTGGTGGCATGCGAG
TTGATGTTACAACAATACGCCGGAGCGATCACGCAAGAGGCTTACGGCGTTGATGAAAGC
TGGAGAGTTGACCCTCAACGTGCCCGTCTCCTTTCGCCAGTCATTACAAGAGTTGTTCAG
GATCTCATGCGTTCATCTCGTGACGGCGATGGTGCCATGGTGATCGTCCGAATCCCGTCA
TCGATCCTGGCCACCCGCTTTCACGACTCAATTACCGAAACTAGAGACAAACTGGGTCTT
GAGCGTGTCTTCGAGGTGGTGCTATATTCCAGTTGCGACAAAGAAGTTGCCCTGTCACGA
CATTTTCTAAGGATGCTAAAGAATTGGAATCCGGAAACAAGAGATTGGATGCCAACTTCA
CTCGAGGATCTGGTCGGTATTCCGTGTATTGTAGTGTATGAAGGTGAAGGCCTAGTCAAC
CAACGTATACCAAGGAACATTCAGCACGTCGATCTCCGTATGGTGTTCGAGGGCTCTGGC
GATTTGAATCGCAGCTTGATCGAGCGGGAACTGTCAATCTGCCATCCGGTCTGCTATCAA
CCCGCCAACGCAAGCCAGCGCACGCAGTCGCCACCCAAAAAGCGCCAGAAACATTCGTCG
GACGACGAGGGAGCCCTACAAGTGGTGGAACAAGAAGGTAATACTATTACAGCC

InterProScan

Pfam
GREB1 (IPR028422) - T[136-284] 1.9E-11 - T[370-599] 7.1E-18 - T[672-1048] 9.7E-45
PANTHER
GREB1 (IPR028422) - T[136-599] 1.1E-92 - T[671-1063] 1.1E-92

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
GREB1_HUMAN 23.988 % 181 5.5E-46
GRB1L_HUMAN 25.908 % 207 2.09E-54