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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C1.124.v2....'
  2. Transcript 'Haaura.CG.MTP2014.S7...'
  3. Transcript 'Phfumi.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S24140.g09876.01.t

Possible name(s)

MRPL16

Location

S24140 [624 / 1,362]

Sequences

Amino acid sequence

Length: 245

>Phfumi.CG.MTP2014.S24140.g09876.01.p
MSLQCIFFQAVQLYPRALWRCQSVATRRWRPGDYDVDTLQYTNNAPKDGITTLKMLPKAP
ERPPKNRMRKGFLTRGPCIGEGAELQLKQYGVISLKGGLLKFGHLNNISQQVNRFIKRRE
LHAIWRVKAPYHAITKHPLQAVMGGGKGKIDYYVTPVLARQVIFEMGGRIEFSDAYLFLK
GVANNLPFPAMAVEYKMLQEMYEEEKRLEDENENFFTFREIVTKNMQGMRSYVSLADFKQ
FGKMR

Nucleotide sequence

Length: 738

>Phfumi.CG.MTP2014.S24140.g09876.01.t
ATGTCCCTGCAGTGCATATTTTTTCAAGCCGTTCAGCTCTATCCCAGAGCTCTATGGCGC
TGTCAATCAGTTGCAACAAGAAGATGGAGACCAGGCGACTATGATGTTGATACCTTGCAG
TACACAAATAATGCCCCAAAGGACGGCATCACAACACTAAAAATGCTTCCCAAAGCACCG
GAGCGTCCACCGAAAAACAGAATGCGAAAAGGATTTCTAACAAGAGGCCCATGTATTGGA
GAGGGTGCAGAACTTCAATTGAAACAATATGGAGTAATTTCATTGAAAGGGGGTCTACTA
AAATTCGGTCATTTAAACAATATTTCACAACAAGTCAATCGATTTATTAAAAGAAGAGAG
TTGCATGCAATTTGGAGAGTGAAAGCTCCATACCATGCAATTACTAAACATCCCCTTCAG
GCTGTCATGGGTGGGGGCAAAGGAAAAATTGACTATTATGTGACACCAGTTTTGGCCAGA
CAGGTCATATTTGAGATGGGCGGCAGGATTGAATTTTCTGATGCTTATCTTTTCTTGAAA
GGGGTTGCCAACAATTTGCCTTTTCCAGCTATGGCAGTTGAGTATAAAATGTTACAGGAA
ATGTATGAGGAGGAAAAACGTTTGGAGGATGAAAATGAGAACTTTTTTACGTTTCGTGAA
ATTGTTACCAAAAACATGCAGGGAATGCGGTCATACGTCTCACTTGCTGATTTCAAACAA
TTTGGAAAAATGAGATAA

InterProScan

PANTHER
Ribosomal_L16 (IPR000114) - T[57-194] 3.4E-29
Gene3D
Ribosomal_L10e/L16_sf (IPR036920) - T[58-241] 2.4E-31
Pfam
Ribosomal_L10e/L16 (IPR016180) - T[60-191] 2.2E-20
SUPERFAMILY
Ribosomal_L10e/L16_sf (IPR036920) - T[81-198] 5.36E-24
CDD
Ribosomal_L10e/L16 (IPR016180) - T[82-193] 1.3253E-23

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RM16_HUMAN 39.583 % 136 1.72E-39