- Transcript 'Harore.CG.MTP2014.S6...' >
- Transcript 'Cisavi.CG.ENS81.R417...' >
- Transcript 'KH2012:KH.L132.5.v4....' >
- Transcript 'KH2012:KH.C9.80.v1.A...' >
- Transcript 'Phfumi.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S242.g01511.01.t
Possible name(s)
LRGUK; LRRC23; LRRC49
Gene model
Location
S242 [19,607 / 22,093]
Amino acid sequence
Length: 326
>Phfumi.CG.MTP2014.S242.g01511.01.p
MSEGSDFDEEEMAAEEEEKQGEVEAEEEEKLPENSLTQDMIPECLSLLCKIGNGLAHAYV
RLDAHERELTDIELLKNFIHVRYVDVSGNLLRDLSPLNNLTHLLSLKADKNNLTTAKLDS
LPYLQIADFSGNKITTTEGIEHPMLTKLNLNSNLITEISSLSPKFLSNLTTLELRGNKLE
STKGLYLPNLKNLYLAGNLLKQVEDLDKLESLTTLHLRDNQIDKLDGFTPSMKKLQYINL
RGNNLTDLKETAKLINLPFLRALVMNDNPCLEEDGYRIEILIILRRLERLDKEEYSEEER
AEAEDIYEQRRQEELMKDEEGDNDDD
Nucleotide sequence
Length: 981
>Phfumi.CG.MTP2014.S242.g01511.01.t
ATGTCAGAAGGTTCGGATTTCGATGAGGAAGAAATGGCTGCAGAAGAGGAGGAAAAGCAA
GGTGAAGTTGAAGCTGAAGAAGAGGAGAAACTTCCCGAGAATTCTCTTACTCAAGACATG
ATTCCTGAATGTCTTTCATTGCTGTGTAAGATTGGAAATGGACTGGCACATGCTTACGTC
AGGTTGGACGCACATGAAAGAGAACTGACAGATATTGAGTTGTTAAAGAACTTCATTCAT
GTGAGATACGTTGATGTTTCGGGAAATCTCCTGAGGGACTTATCTCCATTAAACAACCTC
ACTCACCTCTTGTCCCTAAAAGCTGACAAAAACAACCTCACCACAGCTAAGCTGGATTCT
CTACCATACTTACAAATCGCAGATTTTTCTGGAAACAAAATCACCACCACTGAAGGAATC
GAGCATCCAATGTTGACCAAGTTAAACTTGAATTCCAACCTAATCACAGAGATAAGCTCG
CTAAGTCCAAAATTTCTTAGCAACCTCACAACTCTGGAGCTAAGAGGAAACAAACTCGAA
TCTACCAAGGGACTTTATTTGCCAAATCTCAAGAACTTATATTTGGCGGGAAACCTGTTG
AAACAAGTGGAAGATTTGGACAAACTTGAAAGCCTTACCACACTTCATCTGCGCGACAAC
CAAATTGACAAGCTAGACGGTTTCACACCATCAATGAAAAAACTACAGTACATCAATTTG
AGAGGAAATAACCTCACAGATTTAAAGGAAACGGCAAAACTAATCAACCTTCCATTTCTC
CGAGCCCTGGTAATGAATGACAACCCTTGCCTGGAAGAGGATGGATACCGAATTGAAATT
CTCATTATCCTGAGGCGCTTAGAGCGACTTGACAAAGAGGAATACAGTGAAGAAGAGAGG
GCAGAAGCTGAGGACATCTATGAGCAGCGAAGGCAAGAAGAACTTATGAAGGATGAGGAA
GGAGATAATGATGATGATTAA
| Gene3D |
LRR_dom_sf (IPR032675) - T[9-186] 2.1E-20 - T[187-308] 2.7E-26 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[80-101] 6.873 - T[102-122] 4.501 - T[123-143] 5.078 - T[144-165] 7.781 - T[168-188] 6.357 - T[189-210] 8.474 - T[211-232] 7.581 - T[234-255] 7.512 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[143-165] 230.0 - T[187-208] 96.0 - T[209-230] 17.0 - T[232-254] 51.0 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LRGUK_HUMAN | 33.818 % | 122 | 7.52E-31 |
| LRC23_HUMAN | 62.63 % | 314 | 1.9E-106 |