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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S6...'
  2. Transcript 'Phfumi.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S2432.g04842.01.t

Possible name(s)

NLRC3; NLRP2; NOD1

Location

S2432 [6,736 / 10,010]

Sequences

Amino acid sequence

Length: 131

>Phfumi.CG.MTP2014.S2432.g04842.01.p
HAIALQMKQLSLSDIPINDDGAEALATCIHNIDQLDLCSCGITSSGAKVLSRAISKRLAL
MKQLSLSNNPINDNGAEYLSTCIHKNPIGNEGAKHLATCIHNIDELVLTKCEITEGGIIE
LSSAIYKRPLQ

Nucleotide sequence

Length: 978

>Phfumi.CG.MTP2014.S2432.g04842.01.t
CATGCAATTGCTTTGCAGATGAAACAATTGTCACTTAGCGACATTCCAATCAACGATGAT
GGAGCTGAAGCTTTAGCAACCTGCATACATAATATTGACCAACTTGATCTTTGTAGTTGT
GGAATCACCAGCAGTGGTGCTAAAGTGTTGTCACGAGCCATATCCAAGAGGTTGGCTCTG
ATGAAACAACTATCGCTTTCCAACAATCCAATCAACGATAATGGAGCAGAATATTTATCT
ACTTGCATACATAAGAATCCAATAGGAAATGAAGGAGCAAAACATTTAGCAACCTGCATA
CATAACATTGATGAACTTGTTCTCACAAAATGTGAAATAACAGAGGGTGGAATCATCGAG
TTGTCATCAGCAATCTACAAAAGACCATTACAGTAAAAACTGTGCTTTTGTTAGGAAGAT
TATGAGTTCATCAACACCACGTCATCAGAGGTTGGTTTAGAAGGAGCCAAACTGGAAGTT
GGTGGATGTATTGTTGAAATTCCACAAAACGCTTTGGATGAAGTAACAACAATCAAACTC
ACTTCTTACTATGGAAAACGAAGCGAAACGGACCAACTGACTCCTTTGCTTAAGTGCGAA
CCAAATCATCTGAAGTTTAGGAAAGATATTTCTATAACTTTACCAACCTGCTACATTTCA
GAAAATCGTCAACAGATCGTGGTACAACAAAGTGTAGATGGTTTGAAGTGGAATGATATT
GAAACCAACTATTACCAAGACAACATGAGGCTGCAATTTTCCACCACACATTTTACATGG
TTTATTTCAAAATGGATGGAGCGTTTTACAACTAAAATGAAATTCTTGAAGTGTGAATTG
GGAGAAAAATTGGAAATCGAAAAACCTAAAACACGATTACTGTATGTTTCTGTATTCGAT
GCTGTTGGTGGCATAAACCGGGAAAGTGCAAAGAAAGGAAGGGAAGACATTTTTTTCACC
TCATTTCAAACAAGGTAA

InterProScan

Gene3D
LRR_dom_sf (IPR032675) - T[2-129] 7.4E-21
Pfam
Leu-rich_rpt (IPR001611) - T[7-26] 0.58 - T[61-80] 0.022

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value