Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Region 'REG00000813'
  2. Transcript 'Phfumi.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S2441.g04849.01.t

Possible name(s)

SMCHD1

Location

S2441 [11,525 / 15,927]

Sequences

Amino acid sequence

Length: 355

>Phfumi.CG.MTP2014.S2441.g04849.01.p
KMDNDEEDAFVYVYDRRSTNGDSEKKKIHIGGVFAFDVFLEKIVKKFSIRSRESFLITTT
GRNVICDDDTFVTMIESGDTLYLLKYLDQPLEAPVSERIEFQPHYDTLIKSGIYEYYASE
GHINPLPFAFAELIDNALAATVKNKGPRCIELSLHINESNGKHALCVYDNGEGMSSRQLN
NWAIYRLSKFNRKERHERVNLVENESDAEGKSDDRQQDGAPKSLNSDISWFGVGGKQAIF
FIGNATRIITKPRGSCDVHEFTMSKDEFRRKERNREAIFAGYIRNRKPGDSSHVAKSDKM
TRGFISKEGNEGFTRIIVSGLSPSHVSFVKHGFNIWTRQLAHIYHYYIHGPEGNS

Nucleotide sequence

Length: 1,065

>Phfumi.CG.MTP2014.S2441.g04849.01.t
AAGATGGATAATGATGAAGAAGACGCCTTTGTTTATGTTTATGACCGTCGGAGTACTAAT
GGCGATTCAGAGAAAAAGAAAATTCATATTGGAGGAGTTTTTGCTTTCGATGTGTTTTTG
GAAAAGATTGTTAAAAAATTTTCCATCCGGTCCCGAGAGTCATTTTTAATAACAACCACA
GGACGAAATGTGATTTGTGATGATGACACATTTGTTACAATGATTGAATCTGGTGACACT
CTGTACCTTCTTAAGTATCTTGACCAACCTCTGGAAGCTCCCGTATCAGAAAGGATTGAG
TTCCAACCCCATTATGACACATTAATAAAAAGTGGAATATATGAGTATTATGCCAGTGAA
GGCCACATCAATCCACTACCTTTTGCTTTTGCGGAATTGATTGATAATGCACTGGCAGCC
ACAGTGAAAAACAAAGGACCCCGATGCATTGAGTTAAGTTTGCACATTAATGAGTCAAAT
GGAAAACACGCTCTGTGTGTTTATGACAATGGAGAGGGTATGTCGTCACGACAACTTAAC
AACTGGGCAATTTACCGACTTTCAAAATTTAACAGAAAAGAGCGGCATGAGAGAGTAAAT
CTGGTTGAAAACGAAAGTGACGCTGAGGGTAAATCTGACGATAGACAACAAGATGGTGCT
CCCAAGTCACTCAACAGCGACATCTCATGGTTCGGAGTTGGTGGAAAGCAAGCAATATTT
TTCATTGGAAATGCAACAAGAATTATCACCAAGCCTAGAGGATCATGTGATGTTCATGAA
TTTACGATGTCAAAAGATGAGTTTCGTCGTAAAGAAAGAAATAGAGAAGCAATATTTGCT
GGATACATCAGAAACAGAAAGCCGGGTGATTCTTCACATGTTGCTAAGTCAGACAAGATG
ACTCGTGGGTTTATTAGCAAAGAGGGAAATGAAGGGTTCACAAGAATTATCGTAAGCGGG
TTGTCTCCTTCCCATGTCAGCTTCGTAAAACATGGATTTAATATTTGGACAAGGCAACTG
GCGCATATTTACCATTATTACATTCACGGACCCGAAGGTAACTCT

InterProScan

Gene3D
HATPase_C_sf (IPR036890) - T[95-324] 2.9E-11
SUPERFAMILY
HATPase_C_sf (IPR036890) - T[96-191] 2.75E-9
CDD
HATPase_C (IPR003594) - T[129-181] 8.77699E-4

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SMHD1_HUMAN 48.991 % 343 5.65E-107