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TRANSCRIPT CARD

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  1. Clone 'cima864291'
  2. Transcript 'Phfumi.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S2484.g04898.01.t

Possible name(s)

SEC23A; SEC23B; SEC24B

Location

S2484 [870 / 4,418]

Sequences

Amino acid sequence

Length: 410

>Phfumi.CG.MTP2014.S2484.g04898.01.p
MTTYQEYILQNEERDGVRLSWNVWPSSRLEATRMVVPLSCLFTPLKERVDMPPIQYEPIL
CTRHTCRAVLNPLCQVDYRSKIWTCNFCYQRNPFPASYAAITETHQPAELIPQFTTLEYQ
LPAQPTIGPVFLFVLDTCMDEEDLQAMKESLQMSLSLLPNNAMVGLITYGKMVQVHELGT
EGISKSYVFRGTKDLAAKQIQEMLGLNKVPSGNQPGQQPSNNANLPANRFLQPLHKCDMF
VTDLLGELQRDPWPVSQGKRPLRSVGTALSIAVGLLECTFPNVPSRVMLFMGGPCTQGPG
MIIDDSLENTIRSWYDIEKDNNKYTKKAVKHYEALSTRAANNGHTIDIYACALDQTGLHE
MKCCTNLTGGLMVMGDSFNTSLFKQTFQKVFSKDSKGEFNMAFNATMEIK

Nucleotide sequence

Length: 1,230

>Phfumi.CG.MTP2014.S2484.g04898.01.t
ATGACAACATACCAGGAGTACATACTTCAAAATGAGGAAAGAGATGGTGTCCGACTTAGT
TGGAATGTATGGCCATCTTCACGACTTGAGGCTACACGAATGGTTGTTCCACTTTCTTGT
CTTTTTACTCCATTAAAAGAAAGAGTGGATATGCCTCCTATTCAGTACGAACCTATACTG
TGCACCAGGCACACATGTCGAGCTGTTCTTAATCCTCTGTGTCAAGTTGATTATCGAAGC
AAAATCTGGACTTGCAACTTCTGCTATCAACGAAACCCATTTCCAGCCAGCTATGCTGCT
ATTACTGAAACCCATCAGCCTGCAGAACTCATACCACAATTTACTACACTTGAATACCAA
CTACCAGCACAACCAACAATTGGACCAGTTTTCCTATTTGTACTTGATACTTGTATGGAT
GAGGAAGATTTACAGGCAATGAAAGAGTCACTTCAAATGTCCCTCAGTCTTTTGCCTAAC
AATGCTATGGTGGGTTTGATAACATATGGAAAAATGGTGCAAGTTCATGAGTTGGGCACG
GAAGGAATTTCAAAGTCATATGTCTTTCGTGGAACCAAAGATTTGGCAGCTAAACAAATC
CAGGAAATGTTGGGACTAAACAAAGTACCCAGTGGAAATCAACCAGGCCAGCAACCAAGC
AATAATGCAAATTTGCCAGCAAATCGATTTCTTCAGCCACTACACAAGTGCGACATGTTC
GTCACTGATCTCCTGGGTGAGTTGCAGCGAGACCCATGGCCAGTTAGCCAGGGAAAACGT
CCTCTGCGCTCAGTTGGCACTGCTCTATCAATTGCTGTGGGTTTGCTCGAGTGCACTTTC
CCAAACGTGCCCTCTCGTGTAATGCTGTTTATGGGCGGCCCATGCACCCAAGGGCCAGGC
ATGATTATCGACGATAGTTTGGAAAATACGATTCGATCGTGGTACGATATCGAAAAGGAC
AACAACAAGTACACCAAGAAAGCAGTGAAGCATTACGAGGCCCTGTCCACTCGGGCGGCC
AACAACGGACATACGATTGATATTTACGCATGCGCACTTGATCAAACTGGCCTTCATGAG
ATGAAATGCTGCACAAACCTTACTGGAGGCCTAATGGTGATGGGCGACTCATTCAACACT
TCTCTCTTCAAGCAAACCTTCCAGAAAGTTTTCTCGAAAGACTCGAAAGGCGAATTTAAC
ATGGCCTTTAACGCCACGATGGAAATCAAG

InterProScan

PANTHER
Sec23 (IPR037364) - T[1-410] 4.3E-221
SUPERFAMILY
Znf_Sec23_Sec24_sf (IPR036174) - T[51-123] 1.29E-20
Pfam
Znf_Sec23_Sec24 (IPR006895) - T[58-98] 3.8E-15
Gene3D
vWFA_dom_sf (IPR036465) - T[128-401] 8.9E-174
SUPERFAMILY
vWFA_dom_sf (IPR036465) - T[129-393] 6.68E-87
Pfam
Sec23/24_trunk_dom (IPR006896) - T[129-391] 4.7E-76

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SC23A_HUMAN 72.927 % 645 0
SC23B_HUMAN 70.388 % 621 0