Aniseed - Transcript Card

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S2583.g04989.02.t

Possible name(s)

AMY1A; AMY1B; AMY1C

Gene model

Phfumi.CG.MTP2014.S2583.g04989

Location

S2583 [7,020 / 10,465]

Sequences

Amino acid sequence

Length: 258

>Phfumi.CG.MTP2014.S2583.g04989.02.p
MVERCNKVGVKIYADVVINHMCWAGYNGTGTGGTYYNSITKDFPGVPYSKLDFNDGNCYS
STKNIDNYKDINQVRNCRLVKLLDLNLGKDYVRGKITGFMNDLISLGMTGFRVDACKHMW
PGDLEVIFKGLNNLLDGSKPFIYQKVIDQGGWGMMPDGNALVFLNNHDNQRGHGGGGGVI
SFKDFYNLKIFTAFMMAWPYGVPRVMSSYSFSTNSEGPPANQRSVNADGSCGNGWVCEHR
WRQIRNMAAFAAAAGSMR

Nucleotide sequence

Length: 774

>Phfumi.CG.MTP2014.S2583.g04989.02.t
ATGGTGGAAAGGTGCAATAAAGTCGGAGTGAAAATTTATGCTGATGTTGTCATCAACCAT
ATGTGCTGGGCAGGTTACAATGGGACGGGAACTGGCGGAACATATTATAACTCGATCACA
AAAGACTTTCCCGGAGTTCCGTATTCCAAACTTGATTTTAACGACGGAAATTGTTACAGC
TCCACCAAAAATATTGACAACTACAAGGATATCAACCAGGTACGAAACTGTCGCCTTGTC
AAACTTCTAGATCTCAACCTTGGAAAAGATTACGTAAGAGGCAAGATAACCGGTTTCATG
AACGACTTGATCTCATTGGGTATGACTGGTTTCCGGGTGGATGCATGTAAGCATATGTGG
CCTGGTGATCTTGAAGTCATCTTCAAGGGTCTCAACAATCTTCTAGATGGATCGAAGCCC
TTTATTTATCAGAAAGTCATCGACCAAGGAGGTTGGGGCATGATGCCTGATGGAAACGCT
CTGGTTTTCCTCAATAACCATGACAACCAGAGAGGTCACGGTGGTGGAGGAGGGGTCATC
AGCTTTAAAGATTTTTACAACCTTAAGATTTTCACAGCTTTCATGATGGCTTGGCCGTAT
GGAGTTCCAAGGGTGATGTCTAGCTATTCCTTCAGCACCAACTCTGAAGGCCCCCCGGCT
AACCAACGAAGTGTAAACGCGGACGGAAGTTGCGGCAACGGATGGGTTTGCGAACACAGA
TGGAGACAAATTAGAAACATGGCTGCCTTTGCCGCTGCTGCAGGAAGTATGAGA

InterProScan

SMART	Glyco_hydro_13_cat_dom (IPR006047) - T[1-251] 6.6E-10
SUPERFAMILY	Glycoside_hydrolase_SF (IPR017853) - T[1-250] 7.2E-55
Pfam	Glyco_hydro_13_cat_dom (IPR006047) - T[1-119] 1.2E-6
PRINTS	Alpha_amylase (IPR006046) - T[9-20] 2.0E-11 - T[108-119] 2.0E-11 - T[141-159] 2.0E-11

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
AMYP_HUMAN	46.203 %	265	4.01E-86
AMY1_HUMAN	46.835 %	269	9.97E-88
AMY2B_HUMAN	46.519 %	264	6.44E-86