- Transcript 'Phfumi.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S263.g01571.01.t
Possible name(s)
ASCC3; HFM1; SNRNP200
Gene model
Location
S263 [32,276 / 39,061]
Amino acid sequence
Length: 2,143
>Phfumi.CG.MTP2014.S263.g01571.01.p
MADASARSLQYEYKANSNLVLQADRSLIDRRPRDEPTGEVLSLQGKLGSIQMGDRAQRTK
PPQMEERKAKRRKRDEDEKGQGNLRGRTLLSDGVDEMVGIVYKPKTKETRETYEILLSFI
QAAIGDQPRDILCGAADEVISVLKNEKHRDKERRKEVQSLLGTLEDTRYHVLVNLGRKIT
DFGIDKDAQTADDNIDETYGVNVQFESDEEGGEEDTYGEVREGSDAEEEEEEGVEADAGM
VVSGNLTNQAGDINITKQKDLHPRDIDAYWLQRNLSKVYDDAIVSQRKAEEVLEILKTTT
DDLQCENQLVLLLGYNQFDFIKVVRQHREMILYCTLLASAQSEAGRNQIEDKMKSDPVLA
NILKQLHDTEKEDIIKEEQERRERLRRSKVDADLEATDADHVKTDDAFQPSHKSIDLDDL
EFGQGSHFMANKKCQLPDGSYRKQWKGYEEVHVPALKHKPFDDKEKLVPIDTLPKFAQAA
FSGFKTLNRVQSKLSKTCLESDENVLLCAPTGAGKTNVALLCMLKEIGKHINNDGTIKLD
SFKIIYIAPMKSLVQEMVGNFGKRLANYGIKVSELTGDHQLCKEEINATQVIVCTPEKWD
IITRKGGERTYTQLVRLIIMDEIHMLHDGRGPVLEAIVARTIRSIETTQEDVRLVGLSAT
LPNYEDVATFLRVDPAKGLFYFDNSFRPVPLEQQYIGITEKKPLKRFQVMNEIVYEKVVD
NAGKNQVLIFVHSRKETGKTARAIRDMCLENDTLGNFLREGSASTEVLRTEAEQVKNFEL
KDLLPYGFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTSTLAWGVNLPAHTVIIKGTQVY
SPEKGRWVELGALDVLQMMGRAGRPQYDTKGEGVLITAHSELQYYLSLLNQQLPVESQMI
SKLPDAINAEIVLGNIQSVKDAVTWLGYTYLYIRALRNPSLYGVESLAEDPLLQQRRIDL
AHAAVSLLAKNNLAKYDRKTGQIQVTDLGRIASHYYCSNESMATYNQLLKPTLSEIELFR
VFSLSSEFKYITVREEEKLELNKLLEKVPIPVKESIEESSAKVNVLLQAYISQLKLEGFA
LMADMVYVTQSAGRLMRAIYEIVLFRGWAQLADKCLSLCKMIQCRMWQSMTPLRQFKKVP
EEVVKKIEKKNFPWERFYDLGHNEIGELIRMPKMGKTLHKLVHQFPKMELSVHVQPITRS
TLRVELTITPDFQWDDKVHGHSQAFYIFVEDVDSEVILHHEYFLLKRKYATDEHVVNFFV
PVFEPLPPQYFIRIISDKWIASETQLPVSFRHLVLPEKYPPPTELLDLQPLPVTALRNPE
FEALYENNFPCFNPIQTQVFNAIYNGDENVFVGAPTGSGKTICAEFALFRAFSSDPEARC
VYVTPVEAVAELTYKDWREKFEVRLGKRVALLTGETSTDLRLISRASIIIATSERWDVIS
RRWKQRRNVHSVSLFIVDEIHLIGGESGPELEVVCSRMRYIASQLEKQIRIVALGSSLAN
ARDVAQWLGCSAMHTFNFHPNVRPVPLELHIQGFNITHTQSRLLSMAKPVFNAITKHSPK
RAVIIFVPSRKQSKLTAVDVLTYAAADGSPQRFLHCNESELGAYLEHVKDATLKETLCNG
VAYLHDGTTQIERTVVEQLFSSGAVQVLVASRSLCWGLNLAAHLVIVMDTQHYNGKIHAY
VDYPVTDVLQMIGRANRPLKDEEGKCVVMCQTSKKDFFKKFVYEPLPVESHLDHCLHDHF
NAEIVTKIIENKQDAVDYLTWTFLYRRMSQNPNYYNLQGVSHRHLSDSLSELVENTLADL
EQSKCISIEDEMDITPLNLAMIAAYYYINYTTIELFSMSLNAKTKIRGLIEIISNAAEYE
SIQIRRHEDNTLKQLLPKVQYKPQNIRFTDPHIKTNLLLQAHLSRLQLPAELQSDTEQIL
GKAVRLIQACVDVLSSNGWLSPALAAMELAQMVTQAMWSRDSYLKQLPHFGSDLIKKCSD
KEIESVFDILEMEDADREELLQMSEAQMADVARFCNRYPNIELSYDVQNPDNLHAGSPVV
VLVALEREDEVAGPVIAPFFPQKREEGWWVVVGDPKTNSLISIKRLTLQQKAKVKLDFIP
PSAGSHSYTLYFMSDAYMGCDQEYKLTINVRESEGESSGSDSD
Nucleotide sequence
Length: 6,432
>Phfumi.CG.MTP2014.S263.g01571.01.t
ATGGCAGATGCATCTGCCCGTTCGCTGCAGTATGAATACAAGGCAAACTCCAATCTTGTT
CTACAAGCCGACAGATCGTTGATTGACAGAAGACCGAGAGATGAACCGACTGGTGAAGTC
CTCTCCCTTCAGGGCAAACTTGGAAGCATTCAGATGGGCGATCGTGCCCAGCGGACTAAA
CCACCCCAAATGGAGGAACGAAAGGCCAAACGTCGAAAAAGAGATGAAGATGAAAAAGGT
CAAGGAAATTTAAGGGGACGTACCTTACTGTCTGATGGTGTTGATGAAATGGTTGGAATT
GTCTACAAGCCAAAGACAAAAGAGACCAGAGAGACCTATGAAATTTTGCTGAGCTTTATT
CAAGCTGCCATTGGTGATCAGCCAAGAGACATTTTGTGTGGTGCTGCTGATGAGGTGATT
TCTGTGCTTAAGAATGAGAAACACCGTGATAAAGAACGTCGTAAAGAAGTTCAGTCCTTG
CTTGGTACCTTGGAGGACACCAGGTACCATGTACTGGTGAATCTGGGACGAAAAATTACT
GACTTTGGAATTGACAAAGATGCTCAGACTGCAGATGACAACATTGATGAAACCTATGGA
GTCAATGTGCAGTTTGAGTCAGATGAAGAAGGTGGAGAAGAGGACACATATGGGGAAGTG
CGAGAAGGATCAGATGCAGAAGAGGAAGAGGAAGAAGGAGTTGAAGCTGATGCAGGGATG
GTTGTATCAGGAAATCTAACCAACCAAGCTGGTGATATCAACATTACAAAGCAAAAAGAT
CTTCACCCCAGGGATATAGATGCCTACTGGCTGCAGAGAAATCTTAGTAAGGTTTATGAT
GATGCTATTGTTTCACAGAGAAAGGCTGAAGAAGTGCTTGAAATTTTAAAAACAACCACT
GATGACTTGCAGTGTGAAAATCAACTTGTCTTGCTGCTTGGCTATAATCAGTTTGATTTT
ATCAAGGTTGTTCGCCAGCATAGGGAGATGATTTTATACTGCACACTTCTGGCAAGTGCA
CAAAGTGAAGCTGGACGAAACCAAATTGAAGATAAAATGAAATCTGATCCAGTGCTTGCT
AACATTCTGAAGCAACTTCATGACACAGAAAAGGAAGACATTATCAAGGAAGAGCAGGAG
CGAAGAGAGCGCCTCCGCAGAAGTAAAGTTGATGCAGATCTGGAGGCCACTGATGCAGAT
CATGTAAAGACTGATGATGCTTTTCAGCCAAGTCATAAGTCGATCGATTTAGACGACTTG
GAGTTTGGACAGGGTTCTCATTTCATGGCTAACAAAAAGTGCCAACTGCCTGATGGGTCA
TATCGCAAACAGTGGAAGGGGTATGAGGAAGTTCACGTCCCTGCCTTGAAGCACAAGCCA
TTTGATGACAAAGAAAAGCTGGTTCCTATCGACACACTGCCTAAATTTGCACAAGCCGCC
TTCTCTGGCTTTAAAACGCTTAATCGTGTGCAGAGTAAGTTGTCCAAAACATGTCTGGAA
AGTGATGAAAATGTGTTACTATGTGCTCCCACTGGTGCTGGAAAGACCAATGTTGCTTTG
CTGTGCATGTTAAAGGAGATAGGAAAACACATCAACAATGACGGAACCATCAAATTGGAC
AGTTTTAAAATTATCTACATTGCTCCAATGAAGTCACTTGTCCAGGAAATGGTTGGAAAT
TTTGGAAAGCGTCTGGCTAACTATGGTATTAAAGTCTCTGAGTTAACTGGTGATCATCAG
TTGTGCAAAGAAGAAATCAATGCTACCCAAGTTATTGTGTGCACACCAGAGAAATGGGAT
ATTATTACAAGGAAAGGCGGTGAAAGAACATATACACAACTGGTGCGATTGATTATAATG
GATGAGATTCACATGTTGCATGATGGCAGAGGGCCTGTTTTGGAAGCTATTGTGGCTAGA
ACCATTCGATCTATTGAAACAACCCAAGAGGATGTTCGTCTGGTTGGTTTGTCTGCTACT
TTACCAAACTATGAAGATGTTGCCACATTTCTGCGAGTTGATCCTGCGAAAGGCCTATTT
TATTTCGACAACAGTTTTAGACCTGTACCTTTGGAACAGCAGTACATTGGTATCACAGAA
AAAAAGCCATTGAAGAGATTTCAAGTGATGAATGAAATTGTATATGAAAAGGTTGTGGAC
AATGCTGGCAAAAATCAGGTCCTTATCTTTGTGCATTCTCGGAAAGAAACTGGAAAAACA
GCAAGGGCCATCAGGGATATGTGCCTTGAAAACGACACATTGGGAAACTTTCTTCGAGAG
GGTTCTGCATCTACAGAGGTTTTACGCACAGAAGCTGAGCAGGTCAAGAACTTTGAGTTA
AAGGATCTTCTTCCTTATGGTTTTGCTATTCATCATGCTGGAATGACTCGTGTCGACCGT
ACTCTAGTGGAGGATTTGTTTGCTGACAAGCATATTCAGGTATTGGTGTCTACATCTACT
TTAGCATGGGGTGTCAATTTGCCAGCTCACACTGTCATCATCAAAGGCACACAAGTATAC
AGTCCTGAGAAAGGAAGATGGGTTGAACTGGGTGCATTAGATGTTTTGCAGATGATGGGG
CGAGCTGGTCGACCACAGTATGACACAAAAGGTGAGGGTGTTTTGATCACTGCCCATAGT
GAACTTCAGTATTACCTTTCTCTTCTTAATCAACAACTGCCAGTGGAAAGTCAGATGATA
TCCAAGCTACCGGATGCTATCAATGCTGAAATAGTTCTAGGCAACATCCAAAGTGTAAAG
GATGCTGTTACATGGCTGGGTTACACCTACCTTTACATCCGTGCATTAAGAAATCCTTCA
CTGTATGGGGTGGAGTCGCTTGCAGAAGATCCACTTCTCCAGCAGAGAAGAATTGATTTA
GCCCATGCTGCAGTTAGTTTGCTGGCTAAGAACAACCTTGCCAAGTATGACAGGAAAACA
GGTCAAATTCAAGTCACTGATCTTGGCAGAATTGCCAGTCATTATTACTGCTCAAATGAA
AGCATGGCAACATACAACCAACTGTTGAAACCTACATTGAGCGAAATTGAGCTCTTCCGA
GTTTTCTCGCTTTCATCTGAATTCAAGTACATCACTGTCAGAGAAGAAGAAAAACTGGAG
CTAAACAAACTACTGGAAAAAGTACCGATCCCTGTCAAAGAGAGCATTGAAGAATCCTCA
GCCAAGGTTAATGTGTTGCTACAAGCCTATATCTCACAGCTGAAGTTAGAGGGCTTTGCT
TTGATGGCAGATATGGTGTATGTCACACAGAGTGCTGGCCGACTGATGAGAGCTATATAT
GAGATAGTGCTTTTCAGAGGGTGGGCACAACTTGCAGACAAATGCTTATCATTATGCAAA
ATGATCCAGTGTCGAATGTGGCAGTCCATGACACCTTTGCGCCAGTTTAAGAAGGTACCT
GAAGAGGTGGTGAAAAAGATTGAAAAAAAGAATTTTCCTTGGGAGCGCTTTTATGATCTT
GGACACAATGAAATCGGTGAGTTAATCAGGATGCCCAAAATGGGAAAAACCCTTCACAAG
TTGGTTCATCAATTTCCAAAGATGGAGCTCTCAGTGCATGTTCAGCCAATCACAAGGTCA
ACATTGAGGGTTGAATTGACCATCACACCTGATTTTCAGTGGGATGATAAAGTCCACGGT
CACTCACAGGCATTTTACATCTTTGTTGAAGATGTTGACAGTGAAGTCATTCTTCACCAT
GAATATTTTCTGCTAAAACGCAAGTATGCTACTGATGAGCATGTGGTGAACTTTTTTGTT
CCCGTTTTTGAGCCACTGCCACCCCAGTATTTCATACGAATCATCTCAGACAAATGGATT
GCATCGGAAACACAACTTCCAGTTTCGTTTCGTCACTTGGTCCTGCCAGAAAAATACCCA
CCCCCGACAGAGCTGCTTGATTTACAACCCCTACCTGTCACTGCCTTGAGAAATCCAGAG
TTTGAAGCCCTGTACGAAAACAACTTTCCATGCTTCAACCCAATTCAAACCCAAGTTTTC
AATGCAATTTATAATGGTGATGAAAATGTCTTTGTTGGTGCTCCGACTGGCAGTGGTAAA
ACCATTTGTGCTGAGTTTGCTTTGTTCAGGGCATTTAGCAGTGATCCAGAGGCACGCTGT
GTGTATGTTACACCTGTTGAAGCAGTTGCTGAATTGACATACAAGGATTGGAGAGAAAAG
TTTGAGGTTCGCCTAGGCAAACGTGTTGCACTGCTAACAGGTGAGACAAGCACTGATCTT
CGTCTAATATCAAGGGCCTCAATCATTATTGCCACTTCTGAAAGATGGGATGTAATTTCA
CGAAGATGGAAGCAACGCCGCAATGTACATAGTGTGTCACTCTTCATTGTTGATGAAATC
CATTTGATAGGAGGAGAAAGTGGCCCTGAGTTGGAGGTTGTTTGCTCTCGTATGCGTTAC
ATTGCATCCCAACTTGAAAAGCAGATCCGTATCGTGGCACTTGGGTCCTCATTGGCAAAT
GCCAGAGATGTGGCTCAATGGCTTGGTTGTTCAGCAATGCATACCTTCAATTTCCATCCA
AATGTTCGACCAGTTCCACTTGAACTGCACATCCAGGGCTTCAACATCACACACACCCAA
TCCAGACTGTTAAGCATGGCGAAACCTGTATTCAATGCCATCACCAAGCATTCACCCAAG
CGTGCCGTAATCATTTTTGTGCCTTCAAGGAAACAAAGCAAGTTGACAGCAGTTGATGTT
CTCACATATGCAGCCGCTGATGGAAGCCCACAGAGATTCCTGCACTGCAATGAGTCTGAA
CTTGGAGCCTATCTAGAGCATGTAAAGGATGCTACTCTAAAAGAAACTCTGTGCAATGGT
GTAGCCTATCTGCATGATGGTACAACCCAGATTGAAAGGACTGTGGTTGAGCAACTTTTC
TCGTCAGGAGCTGTACAGGTTCTTGTGGCTTCCAGGAGCCTTTGCTGGGGTCTCAACCTT
GCTGCTCATCTTGTTATTGTAATGGACACCCAGCACTACAATGGAAAGATACATGCCTAT
GTGGACTACCCAGTTACAGATGTGCTGCAGATGATAGGAAGAGCCAACCGGCCACTTAAA
GACGAGGAGGGAAAGTGTGTTGTCATGTGCCAAACTTCAAAAAAAGACTTTTTCAAGAAA
TTTGTCTACGAGCCATTGCCAGTGGAGTCTCACTTAGACCACTGCCTTCATGACCATTTC
AATGCTGAGATTGTGACAAAGATCATTGAAAACAAACAGGACGCAGTCGACTATCTCACC
TGGACCTTCTTGTACCGACGTATGAGCCAGAATCCAAACTATTACAACTTGCAAGGGGTG
TCACATCGCCATTTGTCTGACAGTCTGTCTGAACTGGTAGAAAACACTCTTGCTGACCTG
GAGCAATCCAAGTGCATATCGATTGAGGACGAAATGGACATCACCCCATTGAATTTGGCC
ATGATTGCTGCTTACTACTACATTAATTACACAACAATTGAGCTCTTCAGCATGTCCCTA
AATGCCAAAACCAAGATACGGGGTCTCATTGAAATTATCAGCAATGCAGCAGAATATGAA
AGTATCCAGATAAGAAGACATGAAGACAACACATTGAAGCAACTTCTACCCAAAGTCCAA
TACAAGCCACAAAACATCAGGTTTACTGACCCCCACATTAAGACCAACCTACTGCTACAA
GCCCATCTATCAAGACTTCAGCTTCCTGCTGAGCTCCAATCTGACACAGAGCAAATCCTT
GGTAAAGCAGTTCGCCTTATTCAAGCTTGTGTGGATGTTCTTTCATCCAACGGATGGCTT
TCACCTGCCTTGGCAGCTATGGAGCTTGCCCAGATGGTCACACAAGCTATGTGGAGCAGA
GATTCTTACCTTAAACAGCTTCCACACTTTGGCTCTGACCTGATTAAGAAATGTTCTGAC
AAGGAAATTGAGAGTGTTTTTGACATTCTCGAAATGGAAGATGCAGACCGAGAGGAGCTT
TTACAGATGAGCGAGGCACAGATGGCTGATGTTGCTCGCTTCTGCAACAGATACCCAAAC
ATCGAACTGTCCTATGATGTTCAAAACCCTGACAACCTGCATGCAGGCAGCCCAGTTGTG
GTCCTGGTGGCTCTGGAACGTGAAGATGAGGTTGCTGGCCCTGTCATTGCCCCCTTTTTC
CCTCAGAAACGGGAGGAGGGCTGGTGGGTGGTTGTTGGTGACCCTAAAACCAACAGCTTA
ATCTCCATCAAGAGGTTGACCCTTCAGCAAAAAGCTAAAGTCAAACTTGACTTTATACCG
CCATCAGCTGGTTCACACTCATACACTCTCTACTTTATGAGTGATGCTTACATGGGTTGT
GACCAAGAGTACAAACTCACTATCAATGTTCGAGAATCAGAGGGGGAGAGCAGTGGCAGT
GATTCTGATTGA
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[425-672] 4.24E-45 - T[682-894] 2.96E-48 - T[1217-1509] 8.26E-48 - T[1518-1727] 3.28E-42 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[483-694] 1.2E-31 - T[1328-1532] 2.1E-21 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[489-664] 1.5E-25 - T[1334-1494] 1.0E-22 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[496-679] 21.688 - T[1341-1516] 18.142 |
| SMART |
AAA+_ATPase (IPR003593) - T[501-818] 0.19 - T[1346-1521] 2.9 |
| CDD |
Helicase_C (IPR001650) - T[690-864] 2.79966E-15 - T[1613-1709] 7.05327E-9 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[690-927] 11.898 - T[1546-1756] 9.981 |
| Pfam |
Helicase_C (IPR001650) - T[773-864] 4.6E-7 - T[1556-1697] 1.5E-6 |
| SMART |
Helicase_C (IPR001650) - T[774-866] 1.6E-17 - T[1611-1699] 1.9E-13 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[894-996] 1.12E-5 - T[1727-1827] 1.41E-7 |
| SMART |
Sec63-dom (IPR004179) - T[985-1290] 1.1E-127 - T[1816-2128] 1.7E-108 |
| Pfam |
Sec63-dom (IPR004179) - T[986-1289] 7.9E-91 - T[1816-2126] 1.1E-77 |
| Gene3D |
C2_domain_sf (IPR035892) - T[1185-1293] 3.1E-48 - T[2019-2141] 1.0E-46 |
| SUPERFAMILY |
Ig_E-set (IPR014756) - T[2020-2132] 6.58E-32 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ASCC3_HUMAN | 43.197 % | 1512 | 0 |
| U520_HUMAN | 78.089 % | 3507 | 0 |
| HFM1_HUMAN | 31.863 % | 326 | 1.37E-90 |