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- Clone 'cien76406' >
- Transcript 'KH2012:KH.C12.136.v1...' >
- Transcript 'Phfumi.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S263.g01571.02.t
Possible name(s)
ASCC3; HFM1; SNRNP200
Gene model
Location
S263 [32,300 / 39,061]
Amino acid sequence
Length: 2,135
>Phfumi.CG.MTP2014.S263.g01571.02.p
LQYEYKANSNLVLQADRSLIDRRPRDEPTGEVLSLQGKLGSIQMGDRAQRTKPPQMEERK
AKRRKRDEDEKGQGNLRGRTLLSDGVDEMVGIVYKPKTKETRETYEILLSFIQAAIGDQP
RDILCGAADEVISVLKNEKHRDKERRKEVQSLLGTLEDTRYHVLVNLGRKITDFGIDKDA
QTADDNIDETYGVNVQFESDEEGGEEDTYGEVREGSDAEEEEEEGVEADAGMVVSGNLTN
QAGDINITKQKDLHPRDIDAYWLQRNLSKVYDDAIVSQRKAEEVLEILKTTTDDLQCENQ
LVLLLGYNQFDFIKVVRQHREMILYCTLLASAQSEAGRNQIEDKMKSDPVLANILKQLHD
TEKEDIIKEEQERRERLRRSKVDADLEATDADHVKTDDAFQPSHKSIDLDDLEFGQGSHF
MANKKCQLPDGSYRKQWKGYEEVHVPALKHKPFDDKEKLVPIDTLPKFAQAAFSGFKTLN
RVQSKLSKTCLESDENVLLCAPTGAGKTNVALLCMLKEIGKHINNDGTIKLDSFKIIYIA
PMKSLVQEMVGNFGKRLANYGIKVSELTGDHQLCKEEINATQVIVCTPEKWDIITRKGGE
RTYTQLVRLIIMDEIHMLHDGRGPVLEAIVARTIRSIETTQEDVRLVGLSATLPNYEDVA
TFLRVDPAKGLFYFDNSFRPVPLEQQYIGITEKKPLKRFQVMNEIVYEKVVDNAGKNQVL
IFVHSRKETGKTARAIRDMCLENDTLGNFLREGSASTEVLRTEAEQVKNFELKDLLPYGF
AIHHAGMTRVDRTLVEDLFADKHIQVLVSTSTLAWGVNLPAHTVIIKGTQVYSPEKGRWV
ELGALDVLQMMGRAGRPQYDTKGEGVLITAHSELQYYLSLLNQQLPVESQMISKLPDAIN
AEIVLGNIQSVKDAVTWLGYTYLYIRALRNPSLYGVESLAEDPLLQQRRIDLAHAAVSLL
AKNNLAKYDRKTGQIQVTDLGRIASHYYCSNESMATYNQLLKPTLSEIELFRVFSLSSEF
KYITVREEEKLELNKLLEKVPIPVKESIEESSAKVNVLLQAYISQLKLEGFALMADMVYV
TQSAGRLMRAIYEIVLFRGWAQLADKCLSLCKMIQCRMWQSMTPLRQFKKVPEEVVKKIE
KKNFPWERFYDLGHNEIGELIRMPKMGKTLHKLVHQFPKMELSVHVQPITRSTLRVELTI
TPDFQWDDKVHGHSQAFYIFVEDVDSEVILHHEYFLLKRKYATDEHVVNFFVPVFEPLPP
QYFIRIISDKWIASETQLPVSFRHLVLPEKYPPPTELLDLQPLPVTALRNPEFEALYENN
FPCFNPIQTQVFNAIYNGDENVFVGAPTGSGKTICAEFALFRAFSSDPEARCVYVTPVEA
VAELTYKDWREKFEVRLGKRVALLTGETSTDLRLISRASIIIATSERWDVISRRWKQRRN
VHSVSLFIVDEIHLIGGESGPELEVVCSRMRYIASQLEKQIRIVALGSSLANARDVAQWL
GCSAMHTFNFHPNVRPVPLELHIQGFNITHTQSRLLSMAKPVFNAITKHSPKRAVIIFVP
SRKQSKLTAVDVLTYAAADGSPQRFLHCNESELGAYLEHVKDATLKETLCNGVAYLHDGT
TQIERTVVEQLFSSGAVQVLVASRSLCWGLNLAAHLVIVMDTQHYNGKIHAYVDYPVTDV
LQMIGRANRPLKDEEGKCVVMCQTSKKDFFKKFVYEPLPVESHLDHCLHDHFNAEIVTKI
IENKQDAVDYLTWTFLYRRMSQNPNYYNLQGVSHRHLSDSLSELVENTLADLEQSKCISI
EDEMDITPLNLAMIAAYYYINYTTIELFSMSLNAKTKIRGLIEIISNAAEYESIQIRRHE
DNTLKQLLPKVQYKPQNIRFTDPHIKTNLLLQAHLSRLQLPAELQSDTEQILGKAVRLIQ
ACVDVLSSNGWLSPALAAMELAQMVTQAMWSRDSYLKQLPHFGSDLIKKCSDKEIESVFD
ILEMEDADREELLQMSEAQMADVARFCNRYPNIELSYDVQNPDNLHAGSPVVVLVALERE
DEVAGPVIAPFFPQKREEGWWVVVGDPKTNSLISIKRLTLQQKAKVKLDFIPPSAGSHSY
TLYFMSDAYMGCDQEYKLTINVRESEGESSGSDSD
Nucleotide sequence
Length: 6,408
>Phfumi.CG.MTP2014.S263.g01571.02.t
CTGCAGTATGAATACAAGGCAAACTCCAATCTTGTTCTACAAGCCGACAGATCGTTGATT
GACAGAAGACCGAGAGATGAACCGACTGGTGAAGTCCTCTCCCTTCAGGGCAAACTTGGA
AGCATTCAGATGGGCGATCGTGCCCAGCGGACTAAACCACCCCAAATGGAGGAACGAAAG
GCCAAACGTCGAAAAAGAGATGAAGATGAAAAAGGTCAAGGAAATTTAAGGGGACGTACC
TTACTGTCTGATGGTGTTGATGAAATGGTTGGAATTGTCTACAAGCCAAAGACAAAAGAG
ACCAGAGAGACCTATGAAATTTTGCTGAGCTTTATTCAAGCTGCCATTGGTGATCAGCCA
AGAGACATTTTGTGTGGTGCTGCTGATGAGGTGATTTCTGTGCTTAAGAATGAGAAACAC
CGTGATAAAGAACGTCGTAAAGAAGTTCAGTCCTTGCTTGGTACCTTGGAGGACACCAGG
TACCATGTACTGGTGAATCTGGGACGAAAAATTACTGACTTTGGAATTGACAAAGATGCT
CAGACTGCAGATGACAACATTGATGAAACCTATGGAGTCAATGTGCAGTTTGAGTCAGAT
GAAGAAGGTGGAGAAGAGGACACATATGGGGAAGTGCGAGAAGGATCAGATGCAGAAGAG
GAAGAGGAAGAAGGAGTTGAAGCTGATGCAGGGATGGTTGTATCAGGAAATCTAACCAAC
CAAGCTGGTGATATCAACATTACAAAGCAAAAAGATCTTCACCCCAGGGATATAGATGCC
TACTGGCTGCAGAGAAATCTTAGTAAGGTTTATGATGATGCTATTGTTTCACAGAGAAAG
GCTGAAGAAGTGCTTGAAATTTTAAAAACAACCACTGATGACTTGCAGTGTGAAAATCAA
CTTGTCTTGCTGCTTGGCTATAATCAGTTTGATTTTATCAAGGTTGTTCGCCAGCATAGG
GAGATGATTTTATACTGCACACTTCTGGCAAGTGCACAAAGTGAAGCTGGACGAAACCAA
ATTGAAGATAAAATGAAATCTGATCCAGTGCTTGCTAACATTCTGAAGCAACTTCATGAC
ACAGAAAAGGAAGACATTATCAAGGAAGAGCAGGAGCGAAGAGAGCGCCTCCGCAGAAGT
AAAGTTGATGCAGATCTGGAGGCCACTGATGCAGATCATGTAAAGACTGATGATGCTTTT
CAGCCAAGTCATAAGTCGATCGATTTAGACGACTTGGAGTTTGGACAGGGTTCTCATTTC
ATGGCTAACAAAAAGTGCCAACTGCCTGATGGGTCATATCGCAAACAGTGGAAGGGGTAT
GAGGAAGTTCACGTCCCTGCCTTGAAGCACAAGCCATTTGATGACAAAGAAAAGCTGGTT
CCTATCGACACACTGCCTAAATTTGCACAAGCCGCCTTCTCTGGCTTTAAAACGCTTAAT
CGTGTGCAGAGTAAGTTGTCCAAAACATGTCTGGAAAGTGATGAAAATGTGTTACTATGT
GCTCCCACTGGTGCTGGAAAGACCAATGTTGCTTTGCTGTGCATGTTAAAGGAGATAGGA
AAACACATCAACAATGACGGAACCATCAAATTGGACAGTTTTAAAATTATCTACATTGCT
CCAATGAAGTCACTTGTCCAGGAAATGGTTGGAAATTTTGGAAAGCGTCTGGCTAACTAT
GGTATTAAAGTCTCTGAGTTAACTGGTGATCATCAGTTGTGCAAAGAAGAAATCAATGCT
ACCCAAGTTATTGTGTGCACACCAGAGAAATGGGATATTATTACAAGGAAAGGCGGTGAA
AGAACATATACACAACTGGTGCGATTGATTATAATGGATGAGATTCACATGTTGCATGAT
GGCAGAGGGCCTGTTTTGGAAGCTATTGTGGCTAGAACCATTCGATCTATTGAAACAACC
CAAGAGGATGTTCGTCTGGTTGGTTTGTCTGCTACTTTACCAAACTATGAAGATGTTGCC
ACATTTCTGCGAGTTGATCCTGCGAAAGGCCTATTTTATTTCGACAACAGTTTTAGACCT
GTACCTTTGGAACAGCAGTACATTGGTATCACAGAAAAAAAGCCATTGAAGAGATTTCAA
GTGATGAATGAAATTGTATATGAAAAGGTTGTGGACAATGCTGGCAAAAATCAGGTCCTT
ATCTTTGTGCATTCTCGGAAAGAAACTGGAAAAACAGCAAGGGCCATCAGGGATATGTGC
CTTGAAAACGACACATTGGGAAACTTTCTTCGAGAGGGTTCTGCATCTACAGAGGTTTTA
CGCACAGAAGCTGAGCAGGTCAAGAACTTTGAGTTAAAGGATCTTCTTCCTTATGGTTTT
GCTATTCATCATGCTGGAATGACTCGTGTCGACCGTACTCTAGTGGAGGATTTGTTTGCT
GACAAGCATATTCAGGTATTGGTGTCTACATCTACTTTAGCATGGGGTGTCAATTTGCCA
GCTCACACTGTCATCATCAAAGGCACACAAGTATACAGTCCTGAGAAAGGAAGATGGGTT
GAACTGGGTGCATTAGATGTTTTGCAGATGATGGGGCGAGCTGGTCGACCACAGTATGAC
ACAAAAGGTGAGGGTGTTTTGATCACTGCCCATAGTGAACTTCAGTATTACCTTTCTCTT
CTTAATCAACAACTGCCAGTGGAAAGTCAGATGATATCCAAGCTACCGGATGCTATCAAT
GCTGAAATAGTTCTAGGCAACATCCAAAGTGTAAAGGATGCTGTTACATGGCTGGGTTAC
ACCTACCTTTACATCCGTGCATTAAGAAATCCTTCACTGTATGGGGTGGAGTCGCTTGCA
GAAGATCCACTTCTCCAGCAGAGAAGAATTGATTTAGCCCATGCTGCAGTTAGTTTGCTG
GCTAAGAACAACCTTGCCAAGTATGACAGGAAAACAGGTCAAATTCAAGTCACTGATCTT
GGCAGAATTGCCAGTCATTATTACTGCTCAAATGAAAGCATGGCAACATACAACCAACTG
TTGAAACCTACATTGAGCGAAATTGAGCTCTTCCGAGTTTTCTCGCTTTCATCTGAATTC
AAGTACATCACTGTCAGAGAAGAAGAAAAACTGGAGCTAAACAAACTACTGGAAAAAGTA
CCGATCCCTGTCAAAGAGAGCATTGAAGAATCCTCAGCCAAGGTTAATGTGTTGCTACAA
GCCTATATCTCACAGCTGAAGTTAGAGGGCTTTGCTTTGATGGCAGATATGGTGTATGTC
ACACAGAGTGCTGGCCGACTGATGAGAGCTATATATGAGATAGTGCTTTTCAGAGGGTGG
GCACAACTTGCAGACAAATGCTTATCATTATGCAAAATGATCCAGTGTCGAATGTGGCAG
TCCATGACACCTTTGCGCCAGTTTAAGAAGGTACCTGAAGAGGTGGTGAAAAAGATTGAA
AAAAAGAATTTTCCTTGGGAGCGCTTTTATGATCTTGGACACAATGAAATCGGTGAGTTA
ATCAGGATGCCCAAAATGGGAAAAACCCTTCACAAGTTGGTTCATCAATTTCCAAAGATG
GAGCTCTCAGTGCATGTTCAGCCAATCACAAGGTCAACATTGAGGGTTGAATTGACCATC
ACACCTGATTTTCAGTGGGATGATAAAGTCCACGGTCACTCACAGGCATTTTACATCTTT
GTTGAAGATGTTGACAGTGAAGTCATTCTTCACCATGAATATTTTCTGCTAAAACGCAAG
TATGCTACTGATGAGCATGTGGTGAACTTTTTTGTTCCCGTTTTTGAGCCACTGCCACCC
CAGTATTTCATACGAATCATCTCAGACAAATGGATTGCATCGGAAACACAACTTCCAGTT
TCGTTTCGTCACTTGGTCCTGCCAGAAAAATACCCACCCCCGACAGAGCTGCTTGATTTA
CAACCCCTACCTGTCACTGCCTTGAGAAATCCAGAGTTTGAAGCCCTGTACGAAAACAAC
TTTCCATGCTTCAACCCAATTCAAACCCAAGTTTTCAATGCAATTTATAATGGTGATGAA
AATGTCTTTGTTGGTGCTCCGACTGGCAGTGGTAAAACCATTTGTGCTGAGTTTGCTTTG
TTCAGGGCATTTAGCAGTGATCCAGAGGCACGCTGTGTGTATGTTACACCTGTTGAAGCA
GTTGCTGAATTGACATACAAGGATTGGAGAGAAAAGTTTGAGGTTCGCCTAGGCAAACGT
GTTGCACTGCTAACAGGTGAGACAAGCACTGATCTTCGTCTAATATCAAGGGCCTCAATC
ATTATTGCCACTTCTGAAAGATGGGATGTAATTTCACGAAGATGGAAGCAACGCCGCAAT
GTACATAGTGTGTCACTCTTCATTGTTGATGAAATCCATTTGATAGGAGGAGAAAGTGGC
CCTGAGTTGGAGGTTGTTTGCTCTCGTATGCGTTACATTGCATCCCAACTTGAAAAGCAG
ATCCGTATCGTGGCACTTGGGTCCTCATTGGCAAATGCCAGAGATGTGGCTCAATGGCTT
GGTTGTTCAGCAATGCATACCTTCAATTTCCATCCAAATGTTCGACCAGTTCCACTTGAA
CTGCACATCCAGGGCTTCAACATCACACACACCCAATCCAGACTGTTAAGCATGGCGAAA
CCTGTATTCAATGCCATCACCAAGCATTCACCCAAGCGTGCCGTAATCATTTTTGTGCCT
TCAAGGAAACAAAGCAAGTTGACAGCAGTTGATGTTCTCACATATGCAGCCGCTGATGGA
AGCCCACAGAGATTCCTGCACTGCAATGAGTCTGAACTTGGAGCCTATCTAGAGCATGTA
AAGGATGCTACTCTAAAAGAAACTCTGTGCAATGGTGTAGCCTATCTGCATGATGGTACA
ACCCAGATTGAAAGGACTGTGGTTGAGCAACTTTTCTCGTCAGGAGCTGTACAGGTTCTT
GTGGCTTCCAGGAGCCTTTGCTGGGGTCTCAACCTTGCTGCTCATCTTGTTATTGTAATG
GACACCCAGCACTACAATGGAAAGATACATGCCTATGTGGACTACCCAGTTACAGATGTG
CTGCAGATGATAGGAAGAGCCAACCGGCCACTTAAAGACGAGGAGGGAAAGTGTGTTGTC
ATGTGCCAAACTTCAAAAAAAGACTTTTTCAAGAAATTTGTCTACGAGCCATTGCCAGTG
GAGTCTCACTTAGACCACTGCCTTCATGACCATTTCAATGCTGAGATTGTGACAAAGATC
ATTGAAAACAAACAGGACGCAGTCGACTATCTCACCTGGACCTTCTTGTACCGACGTATG
AGCCAGAATCCAAACTATTACAACTTGCAAGGGGTGTCACATCGCCATTTGTCTGACAGT
CTGTCTGAACTGGTAGAAAACACTCTTGCTGACCTGGAGCAATCCAAGTGCATATCGATT
GAGGACGAAATGGACATCACCCCATTGAATTTGGCCATGATTGCTGCTTACTACTACATT
AATTACACAACAATTGAGCTCTTCAGCATGTCCCTAAATGCCAAAACCAAGATACGGGGT
CTCATTGAAATTATCAGCAATGCAGCAGAATATGAAAGTATCCAGATAAGAAGACATGAA
GACAACACATTGAAGCAACTTCTACCCAAAGTCCAATACAAGCCACAAAACATCAGGTTT
ACTGACCCCCACATTAAGACCAACCTACTGCTACAAGCCCATCTATCAAGACTTCAGCTT
CCTGCTGAGCTCCAATCTGACACAGAGCAAATCCTTGGTAAAGCAGTTCGCCTTATTCAA
GCTTGTGTGGATGTTCTTTCATCCAACGGATGGCTTTCACCTGCCTTGGCAGCTATGGAG
CTTGCCCAGATGGTCACACAAGCTATGTGGAGCAGAGATTCTTACCTTAAACAGCTTCCA
CACTTTGGCTCTGACCTGATTAAGAAATGTTCTGACAAGGAAATTGAGAGTGTTTTTGAC
ATTCTCGAAATGGAAGATGCAGACCGAGAGGAGCTTTTACAGATGAGCGAGGCACAGATG
GCTGATGTTGCTCGCTTCTGCAACAGATACCCAAACATCGAACTGTCCTATGATGTTCAA
AACCCTGACAACCTGCATGCAGGCAGCCCAGTTGTGGTCCTGGTGGCTCTGGAACGTGAA
GATGAGGTTGCTGGCCCTGTCATTGCCCCCTTTTTCCCTCAGAAACGGGAGGAGGGCTGG
TGGGTGGTTGTTGGTGACCCTAAAACCAACAGCTTAATCTCCATCAAGAGGTTGACCCTT
CAGCAAAAAGCTAAAGTCAAACTTGACTTTATACCGCCATCAGCTGGTTCACACTCATAC
ACTCTCTACTTTATGAGTGATGCTTACATGGGTTGTGACCAAGAGTACAAACTCACTATC
AATGTTCGAGAATCAGAGGGGGAGAGCAGTGGCAGTGATTCTGATTGA
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[417-664] 4.11E-45 - T[674-886] 2.96E-48 - T[1209-1501] 8.26E-48 - T[1510-1719] 3.28E-42 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[475-686] 1.2E-31 - T[1320-1524] 2.1E-21 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[481-656] 1.5E-25 - T[1326-1486] 1.0E-22 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[488-671] 21.688 - T[1333-1508] 18.142 |
| SMART |
AAA+_ATPase (IPR003593) - T[493-810] 0.19 - T[1338-1513] 2.9 |
| CDD |
Helicase_C (IPR001650) - T[682-856] 2.76195E-15 - T[1605-1701] 6.95848E-9 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[682-919] 11.898 - T[1538-1748] 9.981 |
| Pfam |
Helicase_C (IPR001650) - T[765-856] 4.6E-7 - T[1548-1689] 1.5E-6 |
| SMART |
Helicase_C (IPR001650) - T[766-858] 1.6E-17 - T[1603-1691] 1.9E-13 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[886-988] 1.12E-5 - T[1719-1819] 1.41E-7 |
| SMART |
Sec63-dom (IPR004179) - T[977-1282] 1.1E-127 - T[1808-2120] 1.7E-108 |
| Pfam |
Sec63-dom (IPR004179) - T[978-1281] 7.8E-91 - T[1808-2118] 1.1E-77 |
| Gene3D |
C2_domain_sf (IPR035892) - T[1177-1285] 3.1E-48 - T[2011-2133] 1.0E-46 |
| SUPERFAMILY |
Ig_E-set (IPR014756) - T[2012-2124] 6.58E-32 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ASCC3_HUMAN | 43.197 % | 1510 | 0 |
| U520_HUMAN | 78.1 % | 3493 | 0 |
| HFM1_HUMAN | 31.863 % | 325 | 1.48E-90 |