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TRANSCRIPT CARD

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  1. Clone 'ciht037b04' > 
  2. Clone 'cijv421h02' > 
  3. Transcript 'Phfumi.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S2657.g05061.02.t

Possible name(s)

GPSM2; RAPSN; TTC28

Gene model

Phfumi.CG.MTP2014.S2657.g05061

Location

S2657 [3,576 / 7,313]

Sequences

Amino acid sequence

Length: 379

>Phfumi.CG.MTP2014.S2657.g05061.02.p
MGQNNTSSVLALSCSHNGSPDEHAHAHKQLERLLQKLIEKSSGTEALAEFEKGTKGKYKT
SLAKWECLSMAIRILSTWGKYRTVVAFAIRQIELANNMGEQGQISSSASSAWSRTIILAD
SYLNLARGNLMLSNFAKSCDYAQKCLDLIGSIRGGSNESILICGHAFLIRGKGYLGASNF
KLAMESIEKSLSMAHSYDNKALECLACCAMGAFYLEVKDYEKATFFPTKASELLSEYGKE
WNRSFSITTQLSLAAAYRKVGKLEEAMRTCEHVMQVALEERDRLAQAYCMLCFADVHRVR
KDSDRSLPRYDAALGLMIETGHRYGQVLVAIGKAKAHIRGKDFQQALQQYSAGLQLAESI
GCKMASLRIHGELAVLYQR

Nucleotide sequence

Length: 1,137

>Phfumi.CG.MTP2014.S2657.g05061.02.t
ATGGGTCAAAACAACACAAGTAGTGTTTTGGCGCTAAGCTGTTCTCACAACGGTTCGCCG
GACGAACACGCGCATGCGCACAAGCAGCTGGAACGGTTGCTACAGAAACTGATCGAGAAG
TCAAGCGGAACCGAGGCACTTGCCGAGTTTGAAAAGGGCACAAAAGGAAAATACAAAACA
TCTCTCGCGAAATGGGAATGTCTGAGTATGGCGATTCGGATCCTCTCGACTTGGGGGAAG
TACCGGACGGTGGTGGCCTTTGCAATCCGTCAGATCGAGCTTGCCAACAATATGGGAGAA
CAAGGGCAAATCTCATCGAGTGCTTCCAGTGCTTGGAGCCGTACAATTATCCTTGCCGAT
TCGTACCTGAATCTTGCCAGAGGCAACTTGATGCTCTCAAACTTCGCAAAAAGTTGCGAC
TACGCGCAAAAATGCCTTGACCTGATCGGATCAATCCGTGGTGGATCCAATGAGAGCATC
CTAATCTGCGGACACGCTTTCCTCATCCGAGGGAAAGGATATCTGGGAGCCAGCAATTTC
AAGTTAGCGATGGAGAGCATTGAAAAATCGCTTAGTATGGCTCATTCATACGATAACAAA
GCATTGGAGTGTCTCGCGTGCTGCGCGATGGGTGCGTTTTACCTCGAGGTCAAAGATTAC
GAGAAGGCCACGTTCTTCCCTACCAAAGCTTCGGAACTGTTATCTGAATACGGGAAGGAA
TGGAACAGGAGTTTCAGCATCACCACTCAACTCAGTTTGGCGGCAGCTTACAGGAAAGTT
GGGAAACTTGAAGAGGCCATGAGGACATGTGAGCACGTAATGCAAGTTGCTCTGGAGGAG
AGAGACCGACTGGCGCAGGCTTACTGCATGTTGTGTTTCGCTGATGTCCACAGAGTGAGG
AAAGATTCGGACAGGTCCCTGCCGCGCTACGACGCAGCTCTTGGCCTGATGATTGAAACC
GGTCACAGATACGGGCAAGTTCTGGTGGCGATCGGAAAAGCCAAGGCCCACATCAGAGGC
AAAGATTTCCAGCAGGCGCTCCAACAGTATTCAGCTGGTTTACAGCTAGCAGAGTCAATC
GGATGCAAGATGGCGTCACTGCGCATTCACGGGGAGTTGGCAGTTTTGTATCAGCGA

InterProScan

Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[37-224] 8.5E-8 - T[228-379] 2.3E-14
SMART
TPR_repeat (IPR019734) - T[119-152] 25.0 - T[164-197] 38.0 - T[204-237] 18.0 - T[247-280] 31.0 - T[327-360] 39.0

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RAPSN_HUMAN 38.192 % 233 2.39E-73