- Region 'REG00001231' >
- Molecular Tool 'pSoxB2>Msxb' >
- Transcript 'Phfumi.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S2710.g05107.01.t
Possible name(s)
EEA1; FGD4; RBSN
Gene model
Location
S2710 [3,055 / 7,563]
Amino acid sequence
Length: 486
>Phfumi.CG.MTP2014.S2710.g05107.01.p
FDIYKKMRDSRIDRFVIESNKVLIRLDKLMTHSKLTGKQNTKEFEQTLVPWVRDGDVPFC
PTCGDRFYVTRRRHHCRLCGSIMCTKCSLFVPYDFADELVETLRESTSSMPRQRSRSLLV
LPQTSSDNDMTVRCCHDCYRILRKRKDKIEQKYNQPLLVVFYQKLRTAKRTAETLAPEYK
EMASSLNQGEERFELGKANDLRLKLMKLYETIDVLSKKIAAMDTEDEENPPPGICLQLQS
SIRRASHMYLQENMLTLQSLPSLPKLELLQKERRKEQERRVRRQREEAERERAEAKRMKE
LEKAKQERELVEKERVETSKRLHERQVSYNSLNGLVLNDGWTADNDAEDVRPNHQSIDDE
PDPLMEQIEHVRKMLHQAATSGQAEAVKSLTLNLEELKTEYKKQQSVRAFGGGISTTHSE
SSGHSILVNKNPFLENKPPVQKPTPRPTSVKASKSMNPFLEDDADSLNPFLSSPNEDAET
NPFLTS
Nucleotide sequence
Length: 1,458
>Phfumi.CG.MTP2014.S2710.g05107.01.t
TTTGACATCTACAAGAAAATGAGAGATTCCAGGATTGATCGGTTTGTCATTGAATCAAAC
AAAGTACTGATTAGACTTGACAAGTTGATGACCCACAGTAAACTAACCGGAAAACAAAAT
ACAAAAGAATTCGAACAAACCTTAGTTCCATGGGTGAGAGATGGAGATGTCCCCTTCTGT
CCTACCTGCGGAGATCGTTTTTATGTTACACGACGAAGACACCACTGTAGACTCTGTGGC
TCCATCATGTGCACAAAATGCTCACTATTTGTTCCTTATGATTTTGCAGATGAGCTCGTT
GAAACACTTCGTGAATCCACATCATCTATGCCAAGACAGAGAAGCCGCTCTTTATTGGTA
CTGCCCCAAACTTCATCGGATAACGACATGACTGTGCGCTGCTGTCATGACTGCTATAGG
ATCCTCCGAAAACGAAAAGATAAAATCGAACAGAAATACAACCAGCCTTTGTTGGTAGTG
TTTTACCAGAAACTCCGAACAGCAAAACGCACTGCAGAAACGCTGGCCCCTGAATATAAA
GAAATGGCTTCATCACTGAATCAAGGAGAAGAGAGATTTGAGTTGGGAAAAGCTAATGAC
TTGAGACTAAAGTTGATGAAACTGTACGAGACAATCGATGTTTTGAGTAAAAAGATTGCT
GCCATGGATACGGAGGATGAGGAAAATCCTCCACCAGGGATTTGTCTTCAACTGCAATCA
TCGATTCGAAGAGCATCACACATGTATTTGCAGGAAAACATGCTCACCCTTCAATCTCTG
CCTTCTCTTCCTAAACTTGAGCTCCTGCAAAAGGAGCGGAGGAAGGAGCAGGAGAGGAGA
GTAAGAAGACAGAGGGAGGAGGCAGAGAGGGAGCGAGCTGAAGCAAAGAGAATGAAGGAG
CTGGAAAAAGCAAAACAAGAACGAGAACTGGTTGAAAAAGAAAGGGTGGAGACGTCAAAA
CGTCTTCATGAAAGACAAGTTTCCTACAACTCACTAAACGGCCTCGTTTTGAATGATGGT
TGGACAGCCGACAACGATGCAGAGGATGTACGACCCAACCACCAAAGCATTGACGACGAA
CCAGATCCACTAATGGAGCAGATCGAACATGTTCGCAAAATGCTGCACCAAGCTGCCACT
TCTGGGCAGGCAGAAGCGGTCAAGTCCTTAACTCTGAACTTGGAAGAACTAAAAACAGAG
TACAAAAAACAGCAGAGTGTAAGAGCATTTGGGGGTGGTATAAGCACAACACATAGCGAA
AGTTCAGGACACTCGATACTGGTAAACAAAAACCCTTTTCTTGAAAATAAGCCCCCTGTA
CAAAAGCCGACCCCAAGACCAACATCTGTGAAGGCTTCAAAGAGCATGAATCCCTTTCTA
GAGGATGATGCAGATAGTTTAAACCCATTTCTGTCATCACCTAACGAAGATGCGGAGACA
AACCCGTTTTTGACAAGC
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[40-150] 1.4E-12 |
| SMART |
Znf_FYVE (IPR000306) - T[46-144] 1.3E-10 |
| SUPERFAMILY |
Znf_FYVE_PHD (IPR011011) - T[50-162] 1.25E-16 |
| Pfam |
Znf_FYVE (IPR000306) - T[50-143] 5.3E-18 |
| ProSiteProfiles |
Znf_FYVE-rel (IPR017455) - T[54-143] 11.067 |
| SUPERFAMILY |
Rbsn_Rab-bd_sf (IPR036531) - T[359-405] 4.84E-10 |
| Pfam |
Rbsn_Rab_binding_dom (IPR021565) - T[363-404] 2.6E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RBNS5_HUMAN | 35.28 % | 233 | 1.43E-68 |