- Transcript 'Mooccu.CG.ELv1_2.S49...' >
- Transcript 'KH2012:KH.L96.81.v1....' >
- Transcript 'Phfumi.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S272.g01597.01.t
Possible name(s)
ADGRB2; HMCN1; THBS1
Gene model
Location
S272 [22,632 / 28,547]
Amino acid sequence
Length: 734
>Phfumi.CG.MTP2014.S272.g01597.01.p
MLKVFALGVASVVIISFGFVRCLPCDDARQNLAVNGTYNTANQDIPCIDPCDKFGQVIST
QSDCQNHTFCHWNGSFCSLKTVRTVVVNKNRNINLGLAEKLKEDIGDGRTVITGIDPLTP
PWCLKFPASCHIDPYDPNNLSLLDPPVNIPYCKRIPCRNTDPSLEFDGIACHSVPGCYFD
AELFNLRYYFGHSIMSGVPVCHMAIRNRKFHQLVNEYTDNGAKPWNGLFTNCFLEENRKS
IYAPDSGCYMIDVLEYMGVRPKLAGWENITKTECDIIGGCFRQDCYVPMKTYAVNLRAGT
TEPAYAPLESVGAQRCQRLDRSLPPGPFLSAYHQCKQSGCVVDRSVDIDVKQHLLNITLT
HIPPDIRLLFWYLVQSNFVGPDNWQHEADELMRNPQDFIKMYRGVDWMHFKNRLGHIMNK
RPFGRQPEDDAELSASDRFLLLHPQFAASEPSDIPQPPIPVPFPNFPSIPVQPFCPFQIF
SFNGLFPLKGIFDGCCQQNLCYTPRHHISGQASGVASYWAEWGAWGTCSETCGNGIRRSV
RRCVRLRESDSCEGSDKQDLYCFLEKCPDWAAWGNWGSCSKTCGGGQSMRRRECEGVGCR
GESKESRICKTEDCPVLGDWTEWSECNATCSAGVQQRCRSCDDSQTTLSCPPPADLKEIQ
VCDDFCGSIVETSKSKCQGFPTCAITRKYECQLNTEHGPVEGHCQNFKAERKQRCYGSFR
CRFCHWWNNCSEVE
Nucleotide sequence
Length: 3,126
>Phfumi.CG.MTP2014.S272.g01597.01.t
ATGTTGAAAGTTTTTGCACTGGGCGTTGCCAGTGTGGTGATAATATCTTTTGGGTTTGTA
CGATGTTTACCGTGTGACGATGCAAGGCAAAACCTCGCTGTTAACGGAACCTACAACACA
GCCAATCAAGACATTCCCTGCATCGACCCTTGCGACAAATTCGGTCAGGTAATCTCCACG
CAAAGTGACTGTCAAAACCATACTTTCTGTCACTGGAACGGTAGCTTCTGCTCATTAAAA
ACAGTCAGGACTGTTGTGGTCAACAAAAACAGGAACATCAATCTTGGCCTGGCTGAAAAG
TTGAAAGAGGACATCGGAGATGGCAGGACGGTTATTACGGGTATTGATCCACTGACTCCG
CCGTGGTGCTTGAAATTTCCTGCTTCTTGCCACATCGATCCGTACGATCCCAACAACTTA
AGTTTGCTCGACCCACCAGTCAACATTCCGTATTGTAAAAGAATTCCGTGTCGCAACACC
GATCCAAGTCTAGAGTTTGACGGAATCGCCTGCCACTCAGTGCCCGGCTGTTACTTTGAT
GCGGAACTCTTCAACCTGAGATATTACTTCGGTCATTCGATCATGTCGGGGGTGCCAGTT
TGTCATATGGCAATCCGCAACAGGAAGTTTCACCAGCTGGTCAACGAGTACACAGATAAC
GGTGCAAAGCCTTGGAATGGTCTATTTACAAATTGCTTCCTCGAAGAAAACAGAAAAAGC
ATCTACGCCCCTGACTCCGGTTGTTACATGATCGATGTATTGGAATACATGGGAGTTCGA
CCCAAACTAGCCGGTTGGGAAAACATCACGAAAACGGAATGTGACATTATTGGGGGATGC
TTTAGACAAGATTGCTACGTTCCAATGAAAACATACGCAGTAAATTTGCGAGCAGGAACG
ACCGAACCGGCCTACGCACCACTTGAAAGTGTAGGGGCACAAAGATGCCAACGTCTTGAC
CGATCATTGCCACCTGGGCCTTTTCTTAGCGCTTACCATCAATGCAAGCAATCAGGCTGT
GTGGTTGACCGAAGCGTTGATATCGATGTCAAACAGCATCTTTTAAATATTACTTTGACC
CACATACCGCCAGACATCCGCCTTTTGTTTTGGTACCTAGTGCAGTCGAATTTCGTTGGT
CCTGACAACTGGCAACACGAAGCGGATGAGCTTATGAGAAACCCACAGGATTTTATCAAG
ATGTATCGAGGTGTTGACTGGATGCATTTCAAAAATCGCCTTGGTCACATCATGAATAAA
CGCCCTTTCGGCAGACAACCAGAAGATGACGCAGAACTTAGTGCCAGTGACCGATTTTTG
TTGCTTCACCCACAATTTGCTGCGTCAGAACCTTCGGATATACCTCAGCCGCCAATCCCA
GTTCCTTTTCCCAACTTTCCCTCCATCCCAGTGCAACCGTTCTGTCCTTTCCAGATTTTC
AGCTTTAATGGTCTTTTCCCACTTAAGGGCATCTTCGATGGGTGTTGTCAGCAAAACCTT
TGCTACACGCCACGTCACCATATTTCGGGCCAAGCTTCGGGTGTTGCGTCGTACTGGGCC
GAGTGGGGGGCTTGGGGTACGTGTTCGGAAACTTGTGGAAATGGCATAAGGCGATCTGTA
AGACGCTGCGTGCGCCTGAGAGAGAGTGACAGCTGCGAAGGCTCAGACAAACAAGATCTG
TATTGCTTTCTCGAAAAATGTCCAGACTGGGCCGCGTGGGGCAACTGGGGATCGTGCAGT
AAAACATGCGGCGGTGGACAGTCTATGAGAAGACGGGAATGCGAAGGTGTTGGGTGCAGA
GGAGAGTCAAAGGAAAGCAGAATTTGCAAGACGGAAGACTGTCCGGTTTTGGGCGACTGG
ACCGAGTGGAGTGAATGCAATGCGACGTGCTCTGCAGGAGTTCAACAACGATGCAGGAGC
TGCGACGACAGTCAAACGACTCTCTCCTGCCCCCCACCGGCAGATCTCAAAGAGATTCAG
GTTTGCGACGACTTTTGTGGCAGCATAGTAGAAACGAGCAAGTCGAAGTGTCAGGGTTTT
CCTACTTGCGCTATCACTCGCAAATACGAGTGCCAGTTGAACACTGAACACGGCCCCGTC
GAAGGTCACTGCCAGAACTTCAAAGCAGAAAGAAAACAACGATGCTACGGAAGTTTCCGA
TGCCGGTTTTGTCATTGGTGGAACAATTGTTCCGAAGTTGAGTAATTTAAAATGAAGTTG
CTCATTTGTGCGCTGACGATTTCATTGCTGCAAGTTGCTGTGAATTGTGAAGGAGACAAG
GTTGAATGCATGGAAGACCCATGCAACGCAAGCTCTATGGTGATCAAAGACGTCGCGTCT
TGCCCTGGCCACTGTTTTATCAGCCAAGGAAACTGCTACCTGAAAATGTTATTGATTTCA
GTGCCCCCTAAATTGGGAGTGGATGCAAGGTTGTTTGGTTTGGGAAACCAGTTTGGAAAC
AGCGGCCTGTTGCCTGCAGGTTTGCTACCTCCGTTTGGCCCCAACACCCAATGCCCCACG
TTTCCAAACAACTGTGGTCTTAGCCCATTCAGCCTTGACTGGAATAGCTTGGCAACGCCA
CCAGTCAATATTCCTTATTGTCAAAGAATTCCTTGCTCGACGTCCGACCAAACATTAGAC
AGCAATCAGAACGCTTGTTACGCCACCCCGGGTTGTTACTTCGACCAAGAGTTGCACGCC
TATCGCCTTTCGTTCGGATACGCTGCGCTGCCGGGCGTTCCTGTATGCCACAAAGTCGTT
CGCAACGCCAGGTTTCACAGCCTTGTCAACAAATATTTACAGACAAGCAACCAACAATGG
AACGTCGCCTTTACAAACTGCATGATTCAGCAAAACCTCAAAGAGATCCACGAGCAACCA
GCTGGTTGTTACATGGTTTCGGTCTTTCTTTACATGGGAATTCGGCCAAAAACGGCTGGA
TGGAGAGCACCTCCGCTATAGATTTTGGATGAAAGTGCAGCAGAATCAGATCTCGGCCGA
TAACTGGCGTTTCGAATTGTCCAAGCTGAAACGCCAGTCCCCCAACTCAGGCCCTCTGTC
CCAGCTAACCTCGAACCCATTTAATTTGCTGGCCTTTACGCTTGCCATGCGAAACAACCC
GAGTTC
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[515-568] 1.9E-9 - T[569-613] 8.6E-8 - T[614-662] 3.2E-7 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[516-566] 9.462 - T[567-615] 12.645 - T[617-667] 8.985 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[517-567] 2.49E-8 - T[570-614] 2.88E-8 - T[614-662] 3.92E-8 |
| SMART |
TSP1_rpt (IPR000884) - T[519-568] 1.1E-8 - T[570-615] 3.5E-9 - T[617-667] 3.7E-5 |
| Pfam |
TSP1_rpt (IPR000884) - T[521-567] 4.4E-6 - T[572-614] 6.3E-7 - T[618-663] 2.9E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMCN1_HUMAN | 37.037 % | 108 | 7.22E-24 |
| AGRB2_HUMAN | 37.241 % | 100 | 1.31E-21 |
| TSP1_HUMAN | 34.759 % | 101 | 5.66E-22 |