- Clone 'AHC0AAA153YO09' >
- Transcript 'Cisavi.CG.ENS81.R268...' >
- Clone 'man20p04' >
- Transcript 'KH2012:KH.C10.358.v1...' >
- Transcript 'Phfumi.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S272.g01598.02.t
Possible name(s)
ADGRB3; HMCN1; THBS1
Gene model
Location
S272 [33,379 / 34,846]
Amino acid sequence
Length: 488
>Phfumi.CG.MTP2014.S272.g01598.02.p
MSTEVTTTRSLNDNKTDIPEIFLPPGQPKCQELNDNSSEGDFLDQYHSCLTAGCAVGVAR
SRVRREILNTVFSYLPLHLQFHYWKMVQAGEVRPDNWKQLADELIADKKNLTSKFFGAVF
PLGSQLNLPEGSTIRVVPFAFNLSDHTPTTQSPSEPSARRFGLFQAASGPRYTVNSAYPQ
LGTNASEVSGRSGTFPSPGGNDGFPSGVNLAAATSQLAGSGFATSALLLNFFNSPLQLRS
PPPIVLPCPFLPFRWTFFPVLKGSYEGCCDKPLCYIPKDELSNTIRSGAASYLVGWGSWS
PCTLTCGNGTSTRQRLCIGGNCGSVVKETQSCNPQSCAGWATWSAWSECSKTCGGGEQER
SRTCSAGPGKCPGDNEESKPCNRDSCPHYGAWGLWSTCSAACGKDGTKTRHRICYQVSQY
KCKEDKMVETEDCKGPCVNDVVNRLCDENTCRFVEWVRCQENLWTCRGGTRQRVTNQRCD
VGRCAFFG
Nucleotide sequence
Length: 1,467
>Phfumi.CG.MTP2014.S272.g01598.02.t
ATGAGTACTGAAGTCACGACGACGCGATCACTGAACGACAATAAGACAGATATCCCCGAA
ATCTTTCTTCCTCCCGGACAGCCAAAGTGCCAAGAACTGAACGACAACTCATCCGAAGGG
GACTTCCTTGATCAATACCACTCCTGCTTGACGGCAGGTTGTGCTGTTGGTGTTGCTCGC
AGTCGAGTCCGGCGAGAAATACTTAACACTGTATTTTCGTATCTTCCCCTCCACCTCCAG
TTCCATTATTGGAAGATGGTGCAAGCAGGCGAGGTCCGACCAGACAACTGGAAACAGCTC
GCAGACGAGTTGATAGCCGACAAAAAAAACCTGACTTCAAAGTTTTTTGGTGCCGTATTT
CCCCTTGGCAGTCAACTGAACCTGCCGGAGGGAAGCACGATCAGGGTTGTGCCATTCGCC
TTTAACCTATCCGACCATACGCCAACCACTCAGTCGCCTTCTGAACCATCGGCAAGGCGG
TTTGGTTTGTTTCAAGCGGCCAGTGGTCCAAGATATACAGTCAACTCAGCATACCCGCAA
CTTGGTACCAATGCCAGTGAAGTATCAGGAAGAAGCGGAACCTTTCCGAGTCCTGGAGGC
AACGACGGGTTTCCATCTGGAGTCAACCTTGCGGCGGCTACTTCCCAATTAGCCGGATCA
GGATTTGCAACGTCAGCCTTGCTTTTAAACTTCTTTAACAGTCCCTTGCAGCTTCGTTCT
CCGCCGCCGATTGTCCTGCCATGCCCGTTTCTGCCTTTCCGATGGACTTTCTTTCCGGTT
TTAAAGGGCAGCTACGAGGGTTGTTGCGATAAACCTCTGTGCTACATTCCCAAAGACGAG
CTCTCTAATACGATACGATCAGGCGCCGCCTCGTATCTGGTCGGTTGGGGGTCATGGAGC
CCGTGCACGCTCACGTGCGGAAATGGCACCAGTACAAGGCAGCGTCTCTGCATAGGCGGC
AACTGCGGGTCAGTTGTCAAAGAAACCCAATCCTGCAACCCGCAATCGTGCGCGGGCTGG
GCCACGTGGTCCGCATGGAGTGAATGTTCAAAAACGTGCGGCGGGGGAGAACAGGAGCGA
TCTCGTACTTGTTCCGCGGGTCCAGGAAAATGTCCAGGCGACAATGAGGAATCAAAGCCG
TGCAATCGCGACTCGTGCCCACACTACGGCGCATGGGGTCTCTGGTCGACCTGCAGCGCT
GCATGCGGCAAAGATGGAACCAAAACGAGGCATAGGATTTGTTACCAGGTAAGCCAGTAC
AAGTGCAAAGAGGACAAGATGGTTGAGACTGAAGACTGTAAAGGACCTTGTGTAAATGAC
GTGGTAAACAGGTTGTGCGATGAAAACACTTGTCGCTTTGTCGAGTGGGTACGATGCCAA
GAAAACCTGTGGACTTGCCGCGGTGGGACGAGGCAGCGAGTAACGAACCAACGATGTGAC
GTGGGGCGTTGCGCGTTTTTTGGTTGA
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[281-339] 2.8E-8 - T[340-386] 8.4E-12 - T[388-437] 2.0E-7 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[290-336] 10.383 - T[337-387] 13.488 - T[389-438] 8.285 |
| SMART |
TSP1_rpt (IPR000884) - T[294-338] 1.6E-7 - T[340-387] 1.5E-12 - T[389-438] 9.1E-7 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[294-337] 3.92E-9 - T[337-382] 7.59E-11 - T[386-433] 2.88E-7 |
| Pfam |
TSP1_rpt (IPR000884) - T[296-337] 2.8E-7 - T[342-386] 3.7E-11 - T[391-436] 1.2E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMCN1_HUMAN | 41.304 % | 97.1 | 5.4E-21 |
| AGRB3_HUMAN | 37.879 % | 90.5 | 5.65E-19 |
| TSP1_HUMAN | 35.429 % | 90.1 | 5.42E-19 |