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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...' > 
  2. Clone 'cicl029n05' > 
  3. Transcript 'Phmamm.CG.MTP2014.S6...' > 
  4. Transcript 'Phfumi.CG.MTP2014.S3...' > 
  5. Transcript 'Phfumi.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S2826.g05200.01.t

Possible name(s)

DDX6; EIF4A1; EIF4A3

Gene model

Phfumi.CG.MTP2014.S2826.g05200

Location

S2826 [5,489 / 8,457]

Sequences

Amino acid sequence

Length: 272

>Phfumi.CG.MTP2014.S2826.g05200.01.p
MIGRCDLNKDHVQALVLVPTRELALQTSQIAIELSRHMGALNVMVTTGGTNLRDDIMRLE
QSVHVIVATPGRILDLINKGIAKVDHCNMIVLDEADKLLSQDFKQMMDSLVQSLPVSRQI
LLFSATFPVTVKDFMVKHMKKPYEINLMDELTLKGVTQFYAYVEEKKKVHCLNTLFSKLQ
INQSIIFCNSTHRVELLAKKITELGYSCFYIHAKMKQEYRNRVFHDFRQGMCRNLVCSDL
FTRGIDIQAVNVVINFDFPKMPETYLHRIGRS

Nucleotide sequence

Length: 816

>Phfumi.CG.MTP2014.S2826.g05200.01.t
ATGATTGGAAGATGTGATCTAAACAAGGACCATGTACAAGCTCTGGTACTTGTACCGACT
CGTGAATTAGCATTGCAAACATCACAAATTGCGATTGAATTGAGCCGACATATGGGAGCA
CTTAATGTGATGGTTACCACTGGTGGAACAAATCTTCGTGATGACATTATGCGACTTGAG
CAAAGTGTTCATGTTATTGTTGCAACACCTGGACGAATTCTGGATCTAATTAACAAAGGA
ATTGCAAAAGTTGACCACTGCAATATGATTGTCCTTGATGAGGCAGACAAGCTTCTTTCC
CAGGACTTTAAACAAATGATGGACAGTCTTGTTCAGTCTTTGCCTGTCAGTAGACAAATT
CTTCTCTTCTCTGCCACTTTTCCAGTAACGGTCAAGGATTTTATGGTCAAACACATGAAA
AAGCCATATGAAATCAACCTGATGGATGAACTAACCCTGAAAGGTGTGACCCAGTTTTAC
GCATATGTTGAGGAAAAGAAAAAAGTTCACTGTCTCAACACATTGTTCTCCAAGTTGCAA
ATCAACCAATCAATCATCTTCTGTAACTCAACTCACAGAGTTGAACTGCTTGCAAAGAAA
ATTACAGAGCTTGGATATTCTTGTTTTTACATCCATGCTAAAATGAAGCAGGAGTATCGC
AACAGAGTTTTCCATGATTTCCGACAAGGAATGTGCCGCAACCTTGTATGCAGTGACTTG
TTTACACGTGGCATCGACATTCAAGCCGTGAATGTTGTCATTAACTTTGACTTTCCAAAG
ATGCCTGAAACATACCTCCATCGCATTGGACGATCA

InterProScan

ProSiteProfiles
Helicase_ATP-bd (IPR014001) - T[1-145] 24.159
SMART
Helicase_ATP-bd (IPR014001) - T[1-159] 2.6E-17
Pfam
DEAD/DEAH_box_helicase_dom (IPR011545) - T[8-133] 4.1E-28
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[11-271] 5.1E-62
ProSitePatterns
RNA-helicase_DEAD-box_CS (IPR000629) - T[91-99] .
ProSiteProfiles
Helicase_C (IPR001650) - T[155-272] 18.919
CDD
Helicase_C (IPR001650) - T[156-271] 1.52457E-33
Pfam
Helicase_C (IPR001650) - T[168-271] 2.6E-25
SMART
Helicase_C (IPR001650) - T[195-271] 1.1E-21

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
IF4A3_HUMAN 37.918 % 202 1.01E-62
IF4A1_HUMAN 38.519 % 195 4.3E-60
DDX6_HUMAN 76.838 % 459 2.95E-162