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  1. Transcript 'Phfumi.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S294.g01666.01.t

Possible name(s)

CRX; OTX1; OTX2

Location

S294 [1,755 / 4,283]

Sequences

Amino acid sequence

Length: 409

>Phfumi.CG.MTP2014.S294.g01666.01.p
MSYLKSPHYAMNGLGLGHDMNLLHPSVTYPGIQGMHQGAKNMQFGAPPVYSTTRKQRRER
TTFTRAQLDILEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQVQQQQQ
KQKSGNSSSTSSSTSSTNSNNNNKKKSPPTTPTPSTNGPVSSTSPFQQQSHQPAQPPAAP
SNHLPLPQAPSTSPVPGSPASSSGQSVPSVSSAAMMNGAGSTIAHQQGVHGGSIVQNNST
GNIWSPASVSPGASSDGASHVGGLGYAGVPATSSSPYMAAAAAVAHATHSPYAVSSNAQA
AATGGYPQNYPPSHSYFGSMEASYLPSVPFHAGGHTTGMGDMSMVGQQNAHPGSHHGSMQ
SHGAGHHQFMSQSYPYHASAAGGSLNSYSSVSDCVDYKDQTQGWKFQVL

Nucleotide sequence

Length: 1,230

>Phfumi.CG.MTP2014.S294.g01666.01.t
ATGTCGTACTTGAAGTCTCCACACTACGCCATGAACGGCCTAGGTTTGGGACATGACATG
AATCTACTTCACCCATCTGTTACTTATCCAGGCATTCAAGGAATGCATCAAGGAGCAAAG
AACATGCAATTTGGAGCCCCCCCAGTGTACAGCACAACTCGCAAACAACGTCGCGAGCGA
ACTACCTTTACTCGAGCACAATTGGACATCCTGGAAGCACTTTTCGGCAAAACCAGATAC
CCAGACATTTTTATGCGTGAAGAAGTGGCGTTGAAAATTAATCTACCAGAATCTCGTGTT
CAGGTTTGGTTTAAGAATCGCCGTGCAAAATGTCGTCAACAAGTTCAACAACAACAACAA
AAACAAAAATCGGGCAACAGCAGCAGCACCAGTTCAAGCACTAGCAGCACCAACAGCAAC
AATAACAACAAAAAGAAAAGTCCACCAACTACCCCAACACCGTCGACAAATGGACCAGTT
AGCAGCACATCGCCCTTCCAACAACAATCTCACCAACCAGCGCAACCACCAGCAGCACCC
AGCAACCATCTGCCCTTACCGCAAGCACCATCAACTTCGCCGGTACCTGGATCGCCAGCG
TCATCTAGCGGTCAATCAGTTCCCTCTGTTTCGTCAGCGGCCATGATGAACGGCGCAGGA
TCCACAATTGCTCACCAGCAGGGAGTGCACGGAGGCTCGATTGTACAAAACAACAGCACA
GGAAACATATGGAGCCCTGCTTCTGTTTCACCCGGGGCAAGTAGCGACGGAGCAAGCCAC
GTTGGAGGTCTTGGATACGCAGGTGTCCCCGCTACTAGCAGCTCGCCTTACATGGCCGCT
GCAGCTGCGGTAGCGCACGCCACTCATTCGCCGTACGCTGTGTCCAGCAACGCACAAGCT
GCTGCAACAGGTGGATATCCCCAGAACTACCCACCGTCCCATTCTTACTTCGGATCGATG
GAAGCGTCATACTTGCCTTCAGTGCCATTCCACGCGGGCGGACATACCACAGGTATGGGT
GACATGTCAATGGTCGGACAACAAAACGCGCACCCAGGAAGCCACCATGGATCAATGCAA
TCGCACGGGGCTGGACATCACCAATTCATGTCACAGTCATATCCGTACCACGCTAGCGCA
GCAGGTGGAAGCCTTAACTCCTACTCCTCGGTTTCTGACTGCGTTGACTACAAAGATCAA
ACCCAAGGCTGGAAATTTCAGGTCTTGTAA

InterProScan

SUPERFAMILY
Homeobox-like_sf (IPR009057) - T[42-114] 1.8E-23
ProSiteProfiles
Homeobox_dom (IPR001356) - T[54-114] 19.224
SMART
Homeobox_dom (IPR001356) - T[56-118] 1.2E-23
CDD
Homeobox_dom (IPR001356) - T[57-112] 2.22586E-23
Pfam
Homeobox_dom (IPR001356) - T[57-113] 2.1E-21
ProSitePatterns
Homeobox_CS (IPR017970) - T[89-112] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
OTX2_HUMAN 69.912 % 161 1.38E-46
OTX1_HUMAN 70.94 % 169 6.61E-49
CRX_HUMAN 57.522 % 132 1.38E-35





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