Aniseed - Transcript Card

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S2963.g05310.02.t

Possible name(s)

OPN1LW; OPN1MW2; OPN1MW3

Gene model

Phfumi.CG.MTP2014.S2963.g05310

Location

S2963 [14,468 / 16,377]

Sequences

Amino acid sequence

Length: 245

>Phfumi.CG.MTP2014.S2963.g05310.02.p
VLRQPLNYIIVNLAVADMLSAFFGGFISIMANGAGYFFWGKTMCQVEGYVVSNFGVTGLN
CIAVMAFERYFVICKPFGPVRFEDKHAIIGIASTWIWAIIWNTPPLIWWDGYDPEGLGTS
CAPNWFVKGYRERMFIILYFVFCFLLPLAIIVLCYGKLIYTLRQIAKESSLSGSTSPEAE
VTKMVVTMVAAFVLCWLPYASFAMYNVVNPDAQIDYSLGAAPAFFAKTATIYNPLIYIGL
NRQVR

Nucleotide sequence

Length: 735

>Phfumi.CG.MTP2014.S2963.g05310.02.t
GTTTTGCGCCAACCTCTTAACTACATCATTGTGAACTTGGCAGTAGCCGACATGCTCAGT
GCATTTTTCGGCGGGTTCATCAGTATAATGGCAAATGGAGCGGGATACTTCTTCTGGGGA
AAGACTATGTGTCAAGTTGAGGGATATGTAGTGTCCAACTTTGGTGTTACTGGCCTCAAC
TGCATTGCTGTAATGGCGTTCGAAAGATATTTCGTCATTTGCAAGCCTTTTGGTCCAGTT
AGATTTGAAGACAAACACGCGATAATCGGCATAGCCTCAACGTGGATTTGGGCAATTATT
TGGAACACTCCTCCCCTGATTTGGTGGGACGGTTACGATCCCGAGGGACTTGGTACCAGT
TGTGCCCCAAACTGGTTCGTCAAAGGATACAGGGAACGTATGTTTATCATCCTTTACTTT
GTCTTCTGTTTCCTTCTTCCACTTGCCATTATTGTGCTTTGCTATGGAAAACTTATCTAC
ACTCTCCGCCAGATTGCCAAAGAAAGTTCTCTGTCAGGAAGCACAAGCCCTGAGGCCGAG
GTGACCAAGATGGTGGTGACGATGGTGGCAGCTTTTGTATTATGTTGGCTTCCCTACGCC
TCATTTGCTATGTACAACGTTGTTAACCCGGATGCACAGATTGACTATTCGCTTGGTGCG
GCCCCGGCCTTCTTCGCAAAGACTGCTACTATATACAACCCCCTTATATACATTGGTCTT
AATCGACAGGTAAGA

InterProScan

ProSiteProfiles	GPCR_Rhodpsn_7TM (IPR017452) - T[1-237] 33.571
Pfam	GPCR_Rhodpsn (IPR000276) - T[2-237] 4.8E-39
PRINTS	GPCR_Rhodpsn (IPR000276) - T[6-27] 5.1E-31 - T[51-73] 5.1E-31 - T[86-107] 5.1E-31 - T[136-159] 5.1E-31 - T[181-205] 5.1E-31 - T[219-245] 5.1E-31
ProSitePatterns	GPCR_Rhodpsn (IPR000276) - T[57-73] .
ProSitePatterns	Retinal_BS (IPR027430) - T[221-237] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
OPSR_HUMAN	47.368 %	229	2.59E-74
OPSG3_HUMAN	48.988 %	226	7.5E-73
OPSG_HUMAN	48.988 %	226	7.5E-73