- EST 'AHC0AAA235YH09_RM1' >
- EST 'AHC0AAA233YA03_RM1' >
- Transcript 'Phfumi.CG.MTP2014.S8...' >
- Transcript 'KH2012:KH.C11.676.v2...' >
- Transcript 'Phfumi.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S2.g00035.01.t
Possible name(s)
CDK5RAP1; CDKAL1
Gene model
Location
S2 [127,097 / 130,856]
>Phfumi.CG.MTP2014.S2.g00035.01.p
MPSECVEVLDDIEDIATFEARLQSAKALILPHSQSARNKRNTIQNNVEEKEEQKNQDKLL
RKGQKLGKQVVVAGCVPQGAPRQQYIKGLSMIGVQQIDRVVEVVEETLKGNSVRLLGQKK
VNGKKSGGAALSLPKIRRNPLIEIISINTGCLNACTYCKTKHARGNLGSYPVSEIVDRAK
QSFDEGVVEIWLTSEDTGAYGRDIGSSLPELLWQLVEVIPTGCMLRVGMTNPPYILEHLE
EMAKILNHPRVYAFMHVPVQSGSDRTLYEMQREYTVGEFSHVVDFLREKVPGISIATDII
CGFPTETNEDFEETLELCKKYKFPSLFMNQFFPRPGTPAAKMTQIDRKEIKKRTKKLSEL
FSSYEPYKHQLGKRQTVLVTEVAHDKVHYVAHNKYYEQVIVDMEEDLMGKMFDVDIIETG
KHYLRGRRVAEVSSPNMTSPLPKGCVSGLKPQVRL
>Phfumi.CG.MTP2014.S2.g00035.01.t
ATGCCATCTGAGTGCGTTGAGGTGTTAGATGATATTGAAGACATTGCCACATTTGAAGCA
AGGCTGCAATCAGCAAAAGCACTAATTTTGCCACATTCCCAAAGTGCCAGAAACAAAAGG
AATACGATTCAAAACAATGTAGAGGAGAAAGAAGAACAGAAAAATCAAGATAAGTTGTTG
AGAAAAGGACAAAAGCTTGGCAAGCAAGTAGTGGTTGCTGGTTGTGTTCCACAAGGTGCC
CCACGTCAACAATATATCAAAGGCTTATCAATGATTGGAGTTCAACAAATTGATCGGGTT
GTTGAGGTGGTGGAAGAAACATTGAAAGGAAACAGTGTTCGATTGTTGGGTCAAAAGAAA
GTTAATGGAAAGAAGTCTGGGGGAGCTGCTCTGTCTTTGCCTAAAATTCGTCGAAATCCA
CTTATTGAAATCATTAGCATCAATACTGGGTGTTTAAACGCTTGCACATACTGCAAAACA
AAACATGCAAGAGGAAATTTGGGAAGCTATCCTGTTTCTGAAATTGTGGACAGGGCAAAA
CAGTCGTTTGATGAGGGTGTGGTGGAAATTTGGTTGACAAGTGAAGACACTGGAGCTTAT
GGACGTGATATCGGAAGCTCCTTACCTGAACTTCTGTGGCAGTTAGTCGAAGTTATCCCA
ACTGGTTGCATGTTGAGGGTTGGTATGACCAACCCGCCATACATTCTTGAACATCTGGAG
GAAATGGCTAAAATCCTCAACCACCCTCGTGTGTACGCGTTTATGCACGTACCGGTTCAA
TCCGGATCTGACCGGACACTTTATGAGATGCAACGCGAATACACCGTTGGAGAATTTTCG
CACGTTGTTGATTTTCTTCGTGAGAAAGTTCCTGGAATATCGATAGCAACGGACATCATA
TGTGGTTTCCCCACAGAAACAAATGAGGACTTTGAAGAAACGTTGGAGTTGTGCAAAAAA
TACAAGTTTCCAAGTTTATTTATGAATCAGTTTTTTCCGAGACCCGGAACGCCAGCTGCG
AAAATGACACAAATTGATCGAAAGGAGATCAAAAAACGAACAAAAAAGCTTTCTGAACTG
TTTTCGTCATACGAACCTTACAAACATCAACTAGGAAAGCGTCAAACAGTGTTGGTGACT
GAAGTTGCACATGACAAAGTTCATTATGTTGCGCACAACAAATATTACGAGCAAGTTATT
GTCGATATGGAAGAAGATTTGATGGGGAAAATGTTTGATGTCGATATTATTGAAACAGGT
AAGCATTATTTGAGAGGAAGGCGTGTTGCGGAAGTGTCGTCACCAAATATGACGTCACCA
CTACCCAAAGGTTGCGTATCCGGTTTAAAACCACAAGTAAGGCTA
ProSiteProfiles |
Methylthiotransferase_N (IPR013848) - T[1-109] 10.116 |
TIGRFAM |
Methylthiotransferase (IPR005839) - T[47-426] 6.6E-84 |
TIGRFAM |
MiaB-like_B (IPR006466) - T[47-427] 1.2E-130 |
SMART |
Elp3/MiaB/NifB (IPR006638) - T[140-359] 3.8E-36 |
Gene3D |
rSAM_horseshoe (IPR023404) - T[141-370] 1.3E-71 |
ProSitePatterns |
Methylthiotransferase_CS (IPR020612) - T[145-165] . |
SFLD |
rSAM (IPR007197) - T[145-379] 3.8E-25 |
Pfam |
rSAM (IPR007197) - T[146-317] 1.0E-15 |
ProSiteProfiles |
TRAM_dom (IPR002792) - T[368-430] 10.6 |
Pfam |
TRAM_dom (IPR002792) - T[370-427] 4.2E-5 |
Protein Name | Identity | Bit Score | e-value |
---|---|---|---|
CDKAL_HUMAN | 70.277 % | 597 | 0 |