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  1. EST 'AHC0AAA235YH09_RM1'
  2. EST 'AHC0AAA233YA03_RM1'
  3. Transcript 'Phfumi.CG.MTP2014.S8...'
  4. Transcript 'KH2012:KH.C11.676.v2...'
  5. Transcript 'Phfumi.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S2.g00035.01.t

Possible name(s)

CDK5RAP1; CDKAL1

Location

S2 [127,097 / 130,856]

Sequences

Amino acid sequence

Length: 455

>Phfumi.CG.MTP2014.S2.g00035.01.p
MPSECVEVLDDIEDIATFEARLQSAKALILPHSQSARNKRNTIQNNVEEKEEQKNQDKLL
RKGQKLGKQVVVAGCVPQGAPRQQYIKGLSMIGVQQIDRVVEVVEETLKGNSVRLLGQKK
VNGKKSGGAALSLPKIRRNPLIEIISINTGCLNACTYCKTKHARGNLGSYPVSEIVDRAK
QSFDEGVVEIWLTSEDTGAYGRDIGSSLPELLWQLVEVIPTGCMLRVGMTNPPYILEHLE
EMAKILNHPRVYAFMHVPVQSGSDRTLYEMQREYTVGEFSHVVDFLREKVPGISIATDII
CGFPTETNEDFEETLELCKKYKFPSLFMNQFFPRPGTPAAKMTQIDRKEIKKRTKKLSEL
FSSYEPYKHQLGKRQTVLVTEVAHDKVHYVAHNKYYEQVIVDMEEDLMGKMFDVDIIETG
KHYLRGRRVAEVSSPNMTSPLPKGCVSGLKPQVRL

Nucleotide sequence

Length: 1,365

>Phfumi.CG.MTP2014.S2.g00035.01.t
ATGCCATCTGAGTGCGTTGAGGTGTTAGATGATATTGAAGACATTGCCACATTTGAAGCA
AGGCTGCAATCAGCAAAAGCACTAATTTTGCCACATTCCCAAAGTGCCAGAAACAAAAGG
AATACGATTCAAAACAATGTAGAGGAGAAAGAAGAACAGAAAAATCAAGATAAGTTGTTG
AGAAAAGGACAAAAGCTTGGCAAGCAAGTAGTGGTTGCTGGTTGTGTTCCACAAGGTGCC
CCACGTCAACAATATATCAAAGGCTTATCAATGATTGGAGTTCAACAAATTGATCGGGTT
GTTGAGGTGGTGGAAGAAACATTGAAAGGAAACAGTGTTCGATTGTTGGGTCAAAAGAAA
GTTAATGGAAAGAAGTCTGGGGGAGCTGCTCTGTCTTTGCCTAAAATTCGTCGAAATCCA
CTTATTGAAATCATTAGCATCAATACTGGGTGTTTAAACGCTTGCACATACTGCAAAACA
AAACATGCAAGAGGAAATTTGGGAAGCTATCCTGTTTCTGAAATTGTGGACAGGGCAAAA
CAGTCGTTTGATGAGGGTGTGGTGGAAATTTGGTTGACAAGTGAAGACACTGGAGCTTAT
GGACGTGATATCGGAAGCTCCTTACCTGAACTTCTGTGGCAGTTAGTCGAAGTTATCCCA
ACTGGTTGCATGTTGAGGGTTGGTATGACCAACCCGCCATACATTCTTGAACATCTGGAG
GAAATGGCTAAAATCCTCAACCACCCTCGTGTGTACGCGTTTATGCACGTACCGGTTCAA
TCCGGATCTGACCGGACACTTTATGAGATGCAACGCGAATACACCGTTGGAGAATTTTCG
CACGTTGTTGATTTTCTTCGTGAGAAAGTTCCTGGAATATCGATAGCAACGGACATCATA
TGTGGTTTCCCCACAGAAACAAATGAGGACTTTGAAGAAACGTTGGAGTTGTGCAAAAAA
TACAAGTTTCCAAGTTTATTTATGAATCAGTTTTTTCCGAGACCCGGAACGCCAGCTGCG
AAAATGACACAAATTGATCGAAAGGAGATCAAAAAACGAACAAAAAAGCTTTCTGAACTG
TTTTCGTCATACGAACCTTACAAACATCAACTAGGAAAGCGTCAAACAGTGTTGGTGACT
GAAGTTGCACATGACAAAGTTCATTATGTTGCGCACAACAAATATTACGAGCAAGTTATT
GTCGATATGGAAGAAGATTTGATGGGGAAAATGTTTGATGTCGATATTATTGAAACAGGT
AAGCATTATTTGAGAGGAAGGCGTGTTGCGGAAGTGTCGTCACCAAATATGACGTCACCA
CTACCCAAAGGTTGCGTATCCGGTTTAAAACCACAAGTAAGGCTA

InterProScan

ProSiteProfiles
Methylthiotransferase_N (IPR013848) - T[1-109] 10.116
TIGRFAM
Methylthiotransferase (IPR005839) - T[47-426] 6.6E-84
TIGRFAM
MiaB-like_B (IPR006466) - T[47-427] 1.2E-130
SMART
Elp3/MiaB/NifB (IPR006638) - T[140-359] 3.8E-36
Gene3D
rSAM_horseshoe (IPR023404) - T[141-370] 1.3E-71
ProSitePatterns
Methylthiotransferase_CS (IPR020612) - T[145-165] .
SFLD
rSAM (IPR007197) - T[145-379] 3.8E-25
Pfam
rSAM (IPR007197) - T[146-317] 1.0E-15
ProSiteProfiles
TRAM_dom (IPR002792) - T[368-430] 10.6
Pfam
TRAM_dom (IPR002792) - T[370-427] 4.2E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CDKAL_HUMAN 70.277 % 597 0





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