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TRANSCRIPT CARD

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  1. EST 'AV678175' > 
  2. Transcript 'Phfumi.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S2.g00040.01.t

Possible name(s)

VPS25

Gene model

Phfumi.CG.MTP2014.S2.g00040

Location

S2 [147,426 / 147,963]

Sequences

Amino acid sequence

Length: 179

>Phfumi.CG.MTP2014.S2.g00040.01.p
KNTMSASTTFNWPWQYDFPPFFTIQKNADTKAKQIEAWCTLVLEYHQHNKLLKLRVADAL
TSPLFCNKAIERKLPKEGVMEVLESLCRKGNVLWDDKGKTSCVIYWKTIEQWADIIYSWA
SKTGSLNTVCTLHELTQGPQTTTEPFHGLDDWLLLKALSTLQSRGKAELIGEEGVKFFA

Nucleotide sequence

Length: 537

>Phfumi.CG.MTP2014.S2.g00040.01.t
AAAAATACAATGTCTGCTTCGACAACATTCAACTGGCCATGGCAATATGACTTTCCACCA
TTTTTTACAATTCAAAAGAATGCGGACACAAAAGCAAAACAGATTGAAGCTTGGTGTACT
TTGGTTTTGGAATATCATCAACACAACAAGTTATTAAAGTTAAGGGTTGCTGATGCATTG
ACATCCCCACTTTTTTGTAACAAAGCAATCGAAAGAAAACTACCCAAAGAGGGGGTTATG
GAGGTGCTGGAAAGTTTATGCAGAAAAGGAAATGTACTGTGGGATGACAAAGGCAAAACA
TCCTGTGTGATATATTGGAAAACGATCGAACAATGGGCAGACATCATTTACAGCTGGGCA
TCAAAAACAGGTTCCTTAAACACTGTCTGCACACTGCATGAATTAACACAGGGACCACAA
ACAACCACTGAGCCATTTCATGGACTGGATGATTGGTTGTTACTTAAAGCACTTTCTACC
TTGCAGTCAAGAGGAAAAGCTGAGTTAATTGGTGAAGAAGGAGTGAAGTTTTTTGCT

InterProScan

Gene3D
ESCRT-II_cplx_Vps25-sub_N (IPR014041) - T[6-104] 5.3E-35
PANTHER
ESCRT-II_cplx_Vps25-sub (IPR008570) - T[7-178] 7.3E-65
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[10-112] 6.8E-32 - T[107-176] 5.71E-20
Pfam
ESCRT-II_cplx_Vps25-sub (IPR008570) - T[15-150] 3.2E-50
Gene3D
WH-like_DNA-bd_sf (IPR036388) - T[105-178] 4.2E-28

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VPS25_HUMAN 50.286 % 181 8.85E-59